| SRR4457250 | 2nd_leaf | DAH4 | 0.45 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.37 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.51 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.11 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.49 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.71 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.85 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.29 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.82 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.90 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.57 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.86 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.67 | MC |
| SRR3745126 | anther | wt | 0.75 | MC |
| SRR3745127 | anther | wt | 0.86 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.54 | MC |
| SRR7265378 | embryo | 1hA | 0.28 | MC |
| SRR7265382 | embryo | 3hA | 0.40 | MC |
| SRR7265383 | embryo | 3hA | 0.66 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.80 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.85 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.75 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.16 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.48 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.94 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.71 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.44 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.20 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.49 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.33 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.75 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.15 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.44 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.66 | MC |
| SRR1213691 | flower | wt | 0.84 | MC |
| SRR8240826 | leaf | wild_type | 1.17 | MC |
| SRR8240819 | leaf | wild_type | 0.45 | MC |
| SRR8240820 | leaf | wild_type | 0.37 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.94 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.39 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.90 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.45 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.49 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.47 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.46 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.76 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.25 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.93 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.36 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.39 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.69 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.12 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.55 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.77 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.59 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.45 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.24 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.45 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.24 | MC |
| SRR1761530 | leaf | control | 1.45 | MC |
| SRR1761531 | leaf | control | 1.24 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.43 | MC |
| SRR6417967 | leaf | H2O_control | 0.57 | MC |
| SRR6417968 | leaf | H2O_control | 0.41 | MC |
| SRR6417969 | leaf | H2O_control | 0.85 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.07 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.59 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.44 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.61 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.42 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.23 | MC |
| SRR6502090 | leaf | control | 0.67 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.62 | MC |
| SRR6502100 | leaf | control | 0.44 | MC |
| SRR6502101 | leaf | control | 0.61 | MC |
| SRR6168973 | leaf | none (control) | 0.41 | MC |
| SRR8582888 | panicle | AM | 0.83 | MC |
| SRR8582889 | panicle | AM | 0.79 | MC |
| SRR8582890 | panicle | AM | 1.02 | MC |
| SRR5110430 | panicle | Dawn | 0.57 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.32 | MC |
| SRR5110445 | panicle | Dusk | 0.60 | MC |
| SRR5110446 | panicle | Dusk | 0.35 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.65 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.25 | MC |
| SRR4947480 | root | control | 0.66 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.38 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.31 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.70 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.50 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.75 | MC |
| SRR6441554 | seedling | wild_type | 0.29 | MC |
| SRR6441555 | seedling | wild_type | 0.33 | MC |
| SRR3098741 | seedling | wt | 0.19 | MC |
| SRR3098742 | seedling | wt | 0.55 | MC |
| SRR3098743 | seedling | wt | 0.49 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.03 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.39 | MC |
| SRR1944583 | seedling | no_treatment | 0.66 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.61 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.68 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.29 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.85 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.54 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.06 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.67 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.82 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.71 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.37 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.18 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.78 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.26 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.71 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.53 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.72 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.39 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.53 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.55 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.40 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.32 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.29 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.64 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.56 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.21 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.23 | MC |