| SRR4457263 | 2nd_leaf | DAH36 | 3.00 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.96 | MC |
| SRR5560728 | caryopsis | wild_type | 0.26 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.80 | MC |
| SRR7265400 | coleoptile | 2dA | 3.35 | MC |
| SRR7265401 | coleoptile | 2dA | 2.30 | MC |
| SRR7265407 | coleoptile | 3dA | 0.46 | MC |
| SRR7265414 | coleoptile | 4dA | 0.84 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.16 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.27 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.13 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.47 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.71 | MC |
| SRR7265376 | embryo | 1hA | 0.36 | MC |
| SRR7265377 | embryo | 1hA | 0.67 | MC |
| SRR7265378 | embryo | 1hA | 0.29 | MC |
| SRR7265379 | embryo | 1hN | 0.64 | MC |
| SRR7265381 | embryo | 1hN | 0.59 | MC |
| SRR7265386 | embryo | 3hN | 0.55 | MC |
| SRR7265387 | embryo | 3hN | 0.84 | MC |
| SRR7265393 | embryo | 12hN | 0.45 | MC |
| SRR7265396 | embryo | 24hA | 2.39 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.43 | MC |
| SRR1213691 | flower | wt | 0.52 | MC |
| SRR8060835 | leaf | wild_type | 1.78 | MC |
| SRR8060836 | leaf | wild_type | 2.39 | MC |
| SRR8060837 | leaf | wild_type | 1.91 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.06 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.74 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.23 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.78 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.96 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.92 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.39 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.81 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.47 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.11 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.85 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.60 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.13 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.55 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.59 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.75 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.68 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.86 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.54 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.31 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.80 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.07 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.56 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.56 | MC |
| SRR1761528 | leaf | drought | 1.56 | MC |
| SRR504365 | leaf | wt | 3.14 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.33 | MC |
| SRR6417968 | leaf | H2O_control | 0.85 | MC |
| SRR6417969 | leaf | H2O_control | 2.19 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.59 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 2.41 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 3.37 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.62 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 2.12 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.81 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.36 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.74 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.74 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.37 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 3.57 | MC |
| SRR1213692 | leaf | wt | 0.64 | MC |
| SRR1213693 | leaf | wt | 1.28 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.40 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.65 | MC |
| SRR8582888 | panicle | AM | 1.43 | MC |
| SRR8582889 | panicle | AM | 0.68 | MC |
| SRR8582890 | panicle | AM | 1.33 | MC |
| SRR8582891 | panicle | PM | 0.54 | MC |
| SRR8582893 | panicle | PM | 0.39 | MC |
| SRR5110429 | panicle | Dawn | 0.69 | MC |
| SRR5110431 | panicle | Dawn | 0.46 | MC |
| SRR5110432 | panicle | Dawn | 0.83 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.63 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.70 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.52 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.54 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.89 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.15 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.95 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.32 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.73 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.42 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 4.13 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.89 | MC |
| SRR1213694 | root | wt | 2.46 | MC |
| SRR1213695 | root | wt | 0.91 | MC |
| SRR4947504 | root | control | 1.63 | MC |
| SRR4947506 | root | Al | 1.09 | MC |
| SRR6441554 | seedling | wild_type | 2.51 | MC |
| SRR6441555 | seedling | wild_type | 2.06 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.84 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.28 | MC |
| SRR358791 | seedling | wt | 4.84 | MC |
| SRR358792 | seedling | wt | 4.20 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.52 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.77 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.69 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.28 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.74 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.60 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.84 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.66 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.52 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.73 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.30 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.33 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.58 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.89 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.97 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.55 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.66 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.91 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.15 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.47 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.76 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.74 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.52 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.18 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.82 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.82 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.57 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.73 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.77 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.71 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.36 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.50 | MC |