| SRR3745126 | anther | wt | 0.54 | MC |
| SRR358795 | callus | wt | 3.65 | MC |
| SRR358796 | callus | wt | 3.20 | MC |
| SRR358797 | callus | wt | 4.23 | MC |
| SRR358798 | callus | wt | 3.15 | MC |
| SRR6320498 | carpel | wt | 3.50 | MC |
| SRR4947495 | root | control | 0.79 | MC |
| SRR7265400 | coleoptile | 2dA | 1.09 | MC |
| SRR7265401 | coleoptile | 2dA | 1.38 | MC |
| SRR7265402 | coleoptile | 2dA | 1.48 | MC |
| SRR7265403 | coleoptile | 2dN | 1.55 | MC |
| SRR7265404 | coleoptile | 2dN | 0.97 | MC |
| SRR7265405 | coleoptile | 2dN | 1.11 | MC |
| SRR7265406 | coleoptile | 3dA | 0.89 | MC |
| SRR7265407 | coleoptile | 3dA | 1.24 | MC |
| SRR7265408 | coleoptile | 3dA | 0.83 | MC |
| SRR7265409 | coleoptile | 3dN | 1.42 | MC |
| SRR7265410 | coleoptile | 3dN | 1.04 | MC |
| SRR7265411 | coleoptile | 3dN | 0.74 | MC |
| SRR7265412 | coleoptile | 4dA | 0.60 | MC |
| SRR7265413 | coleoptile | 4dA | 1.28 | MC |
| SRR7265414 | coleoptile | 4dA | 1.22 | MC |
| SRR7265415 | coleoptile | 4dN | 0.87 | MC |
| SRR7265416 | coleoptile | 4dN | 1.01 | MC |
| SRR7265417 | coleoptile | 4dN | 0.68 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.33 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.28 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.25 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.10 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.40 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.49 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.58 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.72 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.23 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.20 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.25 | MC |
| SRR7265382 | embryo | 3hA | 3.77 | MC |
| SRR7265383 | embryo | 3hA | 4.48 | MC |
| SRR7265384 | embryo | 3hA | 3.45 | MC |
| SRR7265385 | embryo | 3hN | 3.42 | MC |
| SRR7265388 | embryo | 12hA | 1.43 | MC |
| SRR7265389 | embryo | 12hA | 2.24 | MC |
| SRR7265390 | embryo | 12hA | 2.12 | MC |
| SRR7265391 | embryo | 12hN | 1.92 | MC |
| SRR7265392 | embryo | 12hN | 1.63 | MC |
| SRR7265393 | embryo | 12hN | 1.29 | MC |
| SRR7265394 | embryo | 24hA | 1.92 | MC |
| SRR7265395 | embryo | 24hA | 1.94 | MC |
| SRR7265396 | embryo | 24hA | 1.80 | MC |
| SRR7265397 | embryo | 24hN | 1.45 | MC |
| SRR7265398 | embryo | 24hN | 1.16 | MC |
| SRR7265399 | embryo | 24hN | 1.29 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.39 | MC |
| SRR1213691 | flower | wt | 0.61 | MC |
| SRR8060835 | leaf | wild_type | 1.07 | MC |
| SRR8060836 | leaf | wild_type | 1.24 | MC |
| SRR8060837 | leaf | wild_type | 0.83 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.91 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.56 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.37 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.28 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.57 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.74 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.99 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.10 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.21 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.02 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.96 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.07 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.34 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.16 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.90 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.90 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.34 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.61 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.74 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.47 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.20 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.93 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.62 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.02 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.84 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.45 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.01 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.62 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.14 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.19 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.97 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.19 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.84 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.96 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.29 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.13 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.84 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.96 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.29 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.13 | MC |
| SRR1761528 | leaf | drought | 0.84 | MC |
| SRR1761529 | leaf | drought | 0.96 | MC |
| SRR1761530 | leaf | control | 2.29 | MC |
| SRR1761531 | leaf | control | 2.13 | MC |
| SRR504365 | leaf | wt | 1.39 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.07 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.15 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.71 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.63 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.74 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.04 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.73 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.56 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.56 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.99 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.53 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.92 | MC |
| SRR1213692 | leaf | wt | 0.61 | MC |
| SRR1213693 | leaf | wt | 0.44 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.98 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.00 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.51 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.07 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 1.07 | MC |
| SRR6168973 | leaf | none (control) | 1.60 | MC |
| SRR6168974 | leaf | none (control) | 1.04 | MC |
| SRR6168975 | leaf | none (control) | 0.66 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.27 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.82 | MC |
| SRR6168979 | leaf | none (control) | 0.21 | MC |
| SRR6168980 | leaf | none (control) | 0.54 | MC |
| SRR6168981 | leaf | none (control) | 1.57 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.69 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.81 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.42 | MC |
| SRR8582888 | panicle | AM | 0.33 | MC |
| SRR8582889 | panicle | AM | 0.21 | MC |
| SRR8582890 | panicle | AM | 0.52 | MC |
| SRR8582891 | panicle | PM | 0.43 | MC |
| SRR8582893 | panicle | PM | 0.39 | MC |
| SRR5110429 | panicle | Dawn | 3.46 | MC |
| SRR5110430 | panicle | Dawn | 2.01 | MC |
| SRR5110431 | panicle | Dawn | 2.74 | MC |
| SRR5110432 | panicle | Dawn | 2.29 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.30 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.51 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.06 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 2.32 | MC |
| SRR5110437 | panicle | Dawn + 7h | 1.90 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.55 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.38 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.27 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.37 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.52 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.02 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 3.20 | MC |
| SRR5110445 | panicle | Dusk | 1.95 | MC |
| SRR5110446 | panicle | Dusk | 2.82 | MC |
| SRR5110447 | panicle | Dusk | 2.76 | MC |
| SRR5110448 | panicle | Dusk | 3.20 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.44 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.64 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.48 | MC |
| SRR5110452 | panicle | Dawn + 14h | 3.00 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.30 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 2.26 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 2.25 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.06 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.87 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.02 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.41 | MC |
| SRR5110460 | panicle | Dawn + 21h | 3.10 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.45 | MC |
| SRR1633182 | panicle | WT | 1.82 | MC |
| SRR1633185 | panicle | WT | 2.65 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.28 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.51 | MC |
| SRR1213694 | root | wt | 0.30 | MC |
| SRR1213695 | root | wt | 0.54 | MC |
| SRR4947479 | root | control | 1.18 | MC |
| SRR4947482 | root | Al | 0.44 | MC |
| SRR4947483 | root | Al | 0.74 | MC |
| SRR4947487 | root | control | 0.82 | MC |
| SRR4947490 | root | Al | 1.27 | MC |
| SRR4947491 | root | Al | 1.74 | MC |
| SRR4947494 | root | control | 0.83 | MC |
| SRR4947498 | root | Al | 1.13 | MC |
| SRR4947499 | root | Al | 0.91 | MC |
| SRR4947502 | root | control | 1.22 | MC |
| SRR4947503 | root | control | 0.99 | MC |
| SRR4947506 | root | Al | 0.75 | MC |
| SRR4947507 | root | Al | 1.25 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.31 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.49 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.51 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.51 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.62 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.72 | MC |
| SRR2154083 | seedling | wt | 1.25 | MC |
| SRR2154084 | seedling | wt | 2.03 | MC |
| SRR1944583 | seedling | no_treatment | 1.02 | MC |
| SRR358791 | seedling | wt | 1.96 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.01 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.92 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.92 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.12 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.23 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.43 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.28 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.50 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.31 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.37 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.63 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.55 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.42 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.37 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.67 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.47 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.37 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.50 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.32 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.35 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.34 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.37 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.44 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.68 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.33 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.30 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.98 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.11 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 3.26 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 2.64 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 2.61 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.95 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 2.15 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.92 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.55 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.58 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.16 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 3.15 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.89 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.71 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 2.03 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 4.20 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 2.95 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.23 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.91 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 3.18 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.78 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 3.74 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.31 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.31 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.56 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.52 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.74 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.30 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.95 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.29 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.20 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.25 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.30 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.77 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.49 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.62 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.20 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.34 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.22 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.13 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.56 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.18 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.43 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.75 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.58 | MC |