| SRR4457249 | 2nd_leaf | DAH4 | 0.61 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.37 | MC |
| SRR5560729 | caryopsis | wild_type | 0.59 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.47 | MC |
| SRR7265400 | coleoptile | 2dA | 0.79 | MC |
| SRR7265401 | coleoptile | 2dA | 0.53 | MC |
| SRR7265402 | coleoptile | 2dA | 1.09 | MC |
| SRR7265403 | coleoptile | 2dN | 0.96 | MC |
| SRR7265404 | coleoptile | 2dN | 0.61 | MC |
| SRR7265405 | coleoptile | 2dN | 0.91 | MC |
| SRR7265406 | coleoptile | 3dA | 0.32 | MC |
| SRR7265407 | coleoptile | 3dA | 0.33 | MC |
| SRR7265409 | coleoptile | 3dN | 1.12 | MC |
| SRR7265410 | coleoptile | 3dN | 0.49 | MC |
| SRR7265411 | coleoptile | 3dN | 0.69 | MC |
| SRR7265413 | coleoptile | 4dA | 0.56 | MC |
| SRR7265415 | coleoptile | 4dN | 0.69 | MC |
| SRR7265417 | coleoptile | 4dN | 0.52 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.48 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.36 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.61 | MC |
| SRR7265388 | embryo | 12hA | 0.44 | MC |
| SRR7265389 | embryo | 12hA | 0.53 | MC |
| SRR7265390 | embryo | 12hA | 0.69 | MC |
| SRR7265391 | embryo | 12hN | 1.23 | MC |
| SRR7265392 | embryo | 12hN | 1.01 | MC |
| SRR7265393 | embryo | 12hN | 0.71 | MC |
| SRR7265394 | embryo | 24hA | 0.74 | MC |
| SRR7265395 | embryo | 24hA | 1.11 | MC |
| SRR7265396 | embryo | 24hA | 0.60 | MC |
| SRR7265397 | embryo | 24hN | 1.04 | MC |
| SRR7265398 | embryo | 24hN | 1.44 | MC |
| SRR7265399 | embryo | 24hN | 1.14 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.36 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.69 | MC |
| SRR4457248 | flag_leaf | DAH44 | 0.78 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.32 | MC |
| SRR1213691 | flower | wt | 0.62 | MC |
| SRR8060837 | leaf | wild_type | 0.42 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.61 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.93 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.64 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.71 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.93 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.93 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.96 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.79 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.81 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.79 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.57 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.40 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.81 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.65 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.37 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.43 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.77 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.42 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.50 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.58 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.61 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.54 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.63 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.03 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.88 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.66 | MC |
| SRR504365 | leaf | wt | 0.63 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.53 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.47 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.27 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.26 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.38 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.23 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.45 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.47 | MC |
| SRR1213692 | leaf | wt | 0.53 | MC |
| SRR1213693 | leaf | wt | 0.45 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.60 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.42 | MC |
| SRR6502088 | leaf | control | 0.34 | MC |
| SRR6502089 | leaf | control | 1.90 | MC |
| SRR6502090 | leaf | control | 0.76 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.57 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.73 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.85 | MC |
| SRR6502100 | leaf | control | 1.00 | MC |
| SRR6502101 | leaf | control | 0.50 | MC |
| SRR6502102 | leaf | control | 0.41 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 1.49 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.11 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.58 | MC |
| SRR6168981 | leaf | none (control) | 0.31 | MC |
| SRR8582888 | panicle | AM | 0.51 | MC |
| SRR8582889 | panicle | AM | 0.45 | MC |
| SRR8582890 | panicle | AM | 0.59 | MC |
| SRR8582891 | panicle | PM | 0.67 | MC |
| SRR8582892 | panicle | PM | 1.95 | MC |
| SRR8582893 | panicle | PM | 0.90 | MC |
| SRR5110429 | panicle | Dawn | 1.01 | MC |
| SRR5110430 | panicle | Dawn | 0.79 | MC |
| SRR5110431 | panicle | Dawn | 0.44 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.89 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.44 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.64 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.92 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.78 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.57 | MC |
| SRR5110445 | panicle | Dusk | 0.71 | MC |
| SRR5110446 | panicle | Dusk | 0.79 | MC |
| SRR5110448 | panicle | Dusk | 0.89 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.73 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.64 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.63 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.54 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.46 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.80 | MC |
| SRR1633182 | panicle | WT | 0.75 | MC |
| SRR1633185 | panicle | WT | 1.29 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.24 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.60 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.48 | MC |
| SRR1213695 | root | wt | 0.25 | MC |
| SRR4947482 | root | Al | 0.90 | MC |
| SRR4947497 | root | control | 0.89 | MC |
| SRR4947507 | root | Al | 0.50 | MC |
| SRR4947508 | root | Al | 0.59 | MC |
| SRR6502107 | root | control | 0.34 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.45 | MC |
| SRR6441554 | seedling | wild_type | 0.43 | MC |
| SRR6441555 | seedling | wild_type | 0.27 | MC |
| SRR2154086 | seedling | wt | 1.27 | MC |
| SRR2154082 | seedling | wt | 1.02 | MC |
| SRR2154083 | seedling | wt | 1.44 | MC |
| SRR2154084 | seedling | wt | 0.98 | MC |
| SRR2154085 | seedling | wt | 1.39 | MC |
| SRR2154087 | seedling | wt | 1.51 | MC |
| SRR3098741 | seedling | wt | 0.24 | MC |
| SRR3098742 | seedling | wt | 0.28 | MC |
| SRR3098743 | seedling | wt | 0.35 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.43 | MC |
| SRR1944583 | seedling | no_treatment | 0.96 | MC |
| SRR358791 | seedling | wt | 2.18 | MC |
| SRR358792 | seedling | wt | 0.62 | MC |
| SRR358794 | seedling | wt | 1.75 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.88 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.64 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.36 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.18 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.34 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.50 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.54 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.86 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.43 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.29 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.70 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.76 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.86 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.12 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.30 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.52 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.65 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.48 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.44 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.38 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 0.61 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.31 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.71 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 0.57 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.46 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.55 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.60 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.43 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.36 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.57 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.50 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.63 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.47 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.02 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.50 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.57 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.44 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.73 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.20 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.56 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.29 | MC |