| SRR4457249 | 2nd_leaf | DAH4 | 1.89 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.62 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.68 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.94 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.18 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.42 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.60 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.18 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.02 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.22 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.79 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.97 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.48 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.79 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.81 | MC |
| SRR5560727 | caryopsis | wild_type | 0.41 | MC |
| SRR5560728 | caryopsis | wild_type | 0.52 | MC |
| SRR5560729 | caryopsis | wild_type | 0.52 | MC |
| SRR7265403 | coleoptile | 2dN | 0.47 | MC |
| SRR7265410 | coleoptile | 3dN | 0.41 | MC |
| SRR7265378 | embryo | 1hA | 0.39 | MC |
| SRR7265379 | embryo | 1hN | 0.51 | MC |
| SRR7265381 | embryo | 1hN | 0.64 | MC |
| SRR7265395 | embryo | 24hA | 0.51 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.69 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.79 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.86 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.96 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.85 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.56 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.12 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.66 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.22 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.18 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.44 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.09 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.39 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.78 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.89 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.47 | MC |
| SRR1213691 | flower | wt | 0.75 | MC |
| SRR8060835 | leaf | wild_type | 0.61 | MC |
| SRR8060836 | leaf | wild_type | 0.65 | MC |
| SRR8060837 | leaf | wild_type | 0.42 | MC |
| SRR8240826 | leaf | wild_type | 0.46 | MC |
| SRR8240819 | leaf | wild_type | 1.68 | MC |
| SRR8240820 | leaf | wild_type | 0.36 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.58 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.36 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.13 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.15 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.35 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.43 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.72 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.73 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.52 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.48 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.09 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.68 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.38 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.64 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.96 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.57 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.47 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.53 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.42 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.91 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.80 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.03 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.80 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.39 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.67 | MC |
| SRR6417968 | leaf | H2O_control | 0.65 | MC |
| SRR6417969 | leaf | H2O_control | 0.72 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.00 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.71 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.75 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.33 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.45 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.58 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.77 | MC |
| SRR1213692 | leaf | wt | 2.66 | MC |
| SRR1213693 | leaf | wt | 2.81 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.78 | MC |
| SRR6502088 | leaf | control | 0.80 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.63 | MC |
| SRR6168973 | leaf | none (control) | 0.31 | MC |
| SRR6168974 | leaf | none (control) | 0.54 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.98 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.14 | MC |
| SRR8582888 | panicle | AM | 0.56 | MC |
| SRR8582889 | panicle | AM | 0.39 | MC |
| SRR8582891 | panicle | PM | 1.16 | MC |
| SRR8582892 | panicle | PM | 4.89 | MC |
| SRR8582893 | panicle | PM | 1.43 | MC |
| SRR5110429 | panicle | Dawn | 0.86 | MC |
| SRR5110432 | panicle | Dawn | 0.68 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.43 | MC |
| SRR5110447 | panicle | Dusk | 0.93 | MC |
| SRR5110448 | panicle | Dusk | 1.39 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.68 | MC |
| SRR5110452 | panicle | Dawn + 14h | 2.30 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.36 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.63 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.69 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.63 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.34 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.53 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.31 | MC |
| SRR5126155 | root | "mock,7_days" | 0.32 | MC |
| SRR5126169 | root | "mock,14_days" | 0.46 | MC |
| SRR1213695 | root | wt | 1.95 | MC |
| SRR4947492 | root | Al | 0.61 | MC |
| SRR4947504 | root | control | 0.75 | MC |
| SRR6441554 | seedling | wild_type | 0.33 | MC |
| SRR6441555 | seedling | wild_type | 0.80 | MC |
| SRR2154086 | seedling | wt | 0.97 | MC |
| SRR2154085 | seedling | wt | 1.22 | MC |
| SRR2154087 | seedling | wt | 0.73 | MC |
| SRR3098741 | seedling | wt | 0.73 | MC |
| SRR3098742 | seedling | wt | 0.72 | MC |
| SRR3098743 | seedling | wt | 0.70 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.91 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.47 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.52 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.89 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.79 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.56 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.19 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.72 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.48 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.91 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.63 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.89 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.04 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.17 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.09 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.38 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.29 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.59 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.37 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.74 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.54 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.37 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.60 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.36 | MC |