| SRR4457251 | 2nd_leaf | DAH4 | 0.38 | MC |
| SRR358797 | callus | wt | 3.17 | MC |
| SRR358798 | callus | wt | 1.31 | MC |
| SRR5560727 | caryopsis | wild_type | 1.75 | MC |
| SRR5560728 | caryopsis | wild_type | 1.18 | MC |
| SRR5560729 | caryopsis | wild_type | 2.04 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.87 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.59 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.15 | MC |
| SRR7265400 | coleoptile | 2dA | 0.59 | MC |
| SRR7265401 | coleoptile | 2dA | 0.41 | MC |
| SRR7265406 | coleoptile | 3dA | 1.04 | MC |
| SRR7265407 | coleoptile | 3dA | 1.22 | MC |
| SRR7265408 | coleoptile | 3dA | 0.81 | MC |
| SRR7265416 | coleoptile | 4dN | 0.80 | MC |
| SRR7265417 | coleoptile | 4dN | 0.64 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.45 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.17 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.79 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.62 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.90 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.58 | MC |
| SRR7265384 | embryo | 3hA | 0.51 | MC |
| SRR2338866 | endosprem | control | 1.34 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.90 | MC |
| SRR1213691 | flower | wt | 0.95 | MC |
| SRR8060835 | leaf | wild_type | 1.12 | MC |
| SRR8060837 | leaf | wild_type | 1.10 | MC |
| SRR8240825 | leaf | wild_type | 1.72 | MC |
| SRR8240826 | leaf | wild_type | 0.26 | MC |
| SRR8240818 | leaf | wild_type | 0.36 | MC |
| SRR8240820 | leaf | wild_type | 1.34 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.53 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.44 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.08 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.59 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.62 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.75 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.31 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.78 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.42 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.64 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.65 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.22 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.81 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.55 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.79 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.19 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.36 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.90 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.46 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.55 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.31 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.23 | MC |
| SRR1761528 | leaf | drought | 1.35 | MC |
| SRR504365 | leaf | wt | 1.10 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.30 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.62 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.54 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.06 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.54 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.29 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.80 | MC |
| SRR1213692 | leaf | wt | 1.21 | MC |
| SRR1213693 | leaf | wt | 0.40 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.58 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.71 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.43 | MC |
| SRR6502088 | leaf | control | 1.32 | MC |
| SRR6502089 | leaf | control | 1.02 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.44 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.86 | MC |
| SRR6502100 | leaf | control | 2.28 | MC |
| SRR6502101 | leaf | control | 1.35 | MC |
| SRR6502102 | leaf | control | 0.76 | MC |
| SRR5856927 | leaf | control | 0.28 | MC |
| SRR5856929 | leaf | control | 0.38 | MC |
| SRR5856930 | leaf | salt | 0.62 | MC |
| SRR5856931 | leaf | salt | 0.40 | MC |
| SRR5856932 | leaf | salt | 0.39 | MC |
| SRR5856933 | leaf | control | 0.42 | MC |
| SRR5856935 | leaf | control | 0.23 | MC |
| SRR5856936 | leaf | salt | 0.52 | MC |
| SRR5856937 | leaf | salt | 0.62 | MC |
| SRR5856938 | leaf | salt | 0.50 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 6.59 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 5.83 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.49 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.71 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.66 | MC |
| SRR8582889 | panicle | AM | 0.21 | MC |
| SRR8582890 | panicle | AM | 0.55 | MC |
| SRR8582891 | panicle | PM | 2.34 | MC |
| SRR8582892 | panicle | PM | 1.36 | MC |
| SRR8582893 | panicle | PM | 3.81 | MC |
| SRR5110429 | panicle | Dawn | 1.07 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.24 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.50 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.82 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.31 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.03 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.73 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.15 | MC |
| SRR5110445 | panicle | Dusk | 2.57 | MC |
| SRR5110446 | panicle | Dusk | 0.82 | MC |
| SRR5110447 | panicle | Dusk | 1.07 | MC |
| SRR5110448 | panicle | Dusk | 1.90 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.75 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.06 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.74 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.70 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.76 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.19 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.57 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.36 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.39 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.49 | MC |
| SRR1213694 | root | wt | 0.23 | MC |
| SRR1213695 | root | wt | 0.37 | MC |
| SRR4947505 | root | control | 0.59 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.78 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.72 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.79 | MC |
| SRR1944583 | seedling | no_treatment | 1.77 | MC |
| SRR358791 | seedling | wt | 1.91 | MC |
| SRR358792 | seedling | wt | 2.45 | MC |
| SRR358793 | seedling | wt | 4.05 | MC |
| SRR358794 | seedling | wt | 4.19 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.99 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.07 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.48 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 13.76 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.23 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.06 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.24 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.51 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.66 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.16 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.29 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.56 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.03 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.63 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.07 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.86 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.33 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.04 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.72 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.20 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.03 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.94 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.85 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 0.83 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.06 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.64 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.52 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.84 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.21 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.04 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.07 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.76 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 2.03 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.95 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.86 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.89 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.96 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.29 | MC |