| SRR5560727 | caryopsis | wild_type | 2.53 | MC |
| SRR5560728 | caryopsis | wild_type | 3.49 | MC |
| SRR5560729 | caryopsis | wild_type | 3.25 | MC |
| SRR7265411 | coleoptile | 3dN | 0.40 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.80 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 3.29 | MC |
| SRR2338867 | endosprem | control | 1.23 | MC |
| SRR2338868 | endosprem | high_temperature | 1.57 | MC |
| SRR2338869 | endosprem | high_temperature | 2.62 | MC |
| SRR976168 | flag_leaf | wild_type | 0.42 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.58 | MC |
| SRR1213691 | flower | wt | 2.55 | MC |
| SRR8240825 | leaf | wild_type | 2.16 | MC |
| SRR8240826 | leaf | wild_type | 2.16 | MC |
| SRR8240818 | leaf | wild_type | 0.82 | MC |
| SRR8240820 | leaf | wild_type | 0.29 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 4.30 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.85 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.05 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.22 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.11 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.64 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.63 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.83 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.74 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.95 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.77 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.71 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.08 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.24 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.40 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.52 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.06 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.62 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.84 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.87 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.58 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.83 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.37 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.41 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.50 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.78 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.92 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.76 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.73 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.22 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.80 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.76 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.73 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.22 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.80 | MC |
| SRR1761528 | leaf | drought | 0.76 | MC |
| SRR1761529 | leaf | drought | 0.73 | MC |
| SRR1761530 | leaf | control | 2.22 | MC |
| SRR1761531 | leaf | control | 1.80 | MC |
| SRR504365 | leaf | wt | 0.29 | MC |
| SRR6417969 | leaf | H2O_control | 0.55 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.41 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.80 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.76 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.78 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.54 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.28 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.73 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.34 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.02 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.82 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.49 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.95 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.25 | MC |
| SRR1213692 | leaf | wt | 2.54 | MC |
| SRR1213693 | leaf | wt | 1.68 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.55 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.40 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.54 | MC |
| SRR6502088 | leaf | control | 2.56 | MC |
| SRR6502089 | leaf | control | 2.41 | MC |
| SRR6502090 | leaf | control | 2.42 | MC |
| SRR6168973 | leaf | none (control) | 2.23 | MC |
| SRR6168974 | leaf | none (control) | 2.05 | MC |
| SRR6168975 | leaf | none (control) | 0.81 | MC |
| SRR6168981 | leaf | none (control) | 0.68 | MC |
| SRR8582890 | panicle | AM | 2.41 | MC |
| SRR8582892 | panicle | PM | 5.75 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.50 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.01 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.51 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.28 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.24 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.79 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 3.40 | MC |
| SRR5126147 | root | "mock,1_day" | 2.19 | MC |
| SRR5126148 | root | "mock,1_day" | 3.26 | MC |
| SRR5126149 | root | "mock,1_day" | 2.04 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.26 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.76 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.02 | MC |
| SRR5126153 | root | "mock,7_days" | 2.61 | MC |
| SRR5126157 | root | "mock,7_days" | 2.58 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 4.65 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.95 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 4.92 | MC |
| SRR5126165 | root | "mock,14_days" | 2.73 | MC |
| SRR5126167 | root | "mock,14_days" | 1.05 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.19 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.81 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.32 | MC |
| SRR1213694 | root | wt | 0.61 | MC |
| SRR1213695 | root | wt | 0.86 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.86 | MC |
| SRR6502093 | root | 100 mM NaCl | 3.61 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.27 | MC |
| SRR2154086 | seedling | wt | 3.56 | MC |
| SRR2154085 | seedling | wt | 2.95 | MC |
| SRR2154087 | seedling | wt | 1.81 | MC |
| SRR3098741 | seedling | wt | 1.64 | MC |
| SRR3098742 | seedling | wt | 2.34 | MC |
| SRR3098743 | seedling | wt | 1.24 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.67 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.85 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.95 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 3.22 | MC |
| SRR358793 | seedling | wt | 0.74 | MC |
| SRR358794 | seedling | wt | 1.38 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.80 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.79 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.51 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.63 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.08 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.76 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.39 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.09 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.79 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 4.67 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.85 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.61 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.60 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.00 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.09 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.56 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.18 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.64 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 6.25 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.81 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 5.17 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.51 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 4.06 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.94 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 2.91 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 4.16 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.68 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 0.75 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.31 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.67 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.86 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.35 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.09 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.81 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.14 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.08 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.10 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.32 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.65 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.89 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.09 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.60 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.14 | MC |