| SRR4457252 | 2nd_leaf | DAH12 | 0.26 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.31 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.48 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.47 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.43 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.50 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.51 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.05 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.73 | MC |
| SRR5560727 | caryopsis | wild_type | 0.61 | MC |
| SRR5560728 | caryopsis | wild_type | 0.51 | MC |
| SRR5560729 | caryopsis | wild_type | 0.51 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.50 | MC |
| SRR7265400 | coleoptile | 2dA | 0.28 | MC |
| SRR7265406 | coleoptile | 3dA | 0.46 | MC |
| SRR7265407 | coleoptile | 3dA | 0.25 | MC |
| SRR7265412 | coleoptile | 4dA | 1.05 | MC |
| SRR7265413 | coleoptile | 4dA | 1.15 | MC |
| SRR7265414 | coleoptile | 4dA | 1.00 | MC |
| SRR7265416 | coleoptile | 4dN | 0.48 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.29 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.33 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.10 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.36 | MC |
| SRR7265385 | embryo | 3hN | 0.42 | MC |
| SRR7265391 | embryo | 12hN | 0.47 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.41 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.41 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.57 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.75 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.33 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.72 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.71 | MC |
| SRR1213691 | flower | wt | 0.33 | MC |
| SRR8060835 | leaf | wild_type | 0.26 | MC |
| SRR8060837 | leaf | wild_type | 0.50 | MC |
| SRR504365 | leaf | wt | 0.36 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.88 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.07 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.97 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.84 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.49 | MC |
| SRR6168973 | leaf | none (control) | 1.26 | MC |
| SRR6168974 | leaf | none (control) | 0.78 | MC |
| SRR6168975 | leaf | none (control) | 2.69 | MC |
| SRR6168979 | leaf | none (control) | 0.19 | MC |
| SRR6168981 | leaf | none (control) | 0.77 | MC |
| SRR8582893 | panicle | PM | 0.31 | MC |
| SRR4947496 | root | control | 3.38 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.42 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.24 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.37 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.05 | MC |
| SRR5126147 | root | "mock,1_day" | 0.78 | MC |
| SRR5126148 | root | "mock,1_day" | 0.81 | MC |
| SRR5126149 | root | "mock,1_day" | 0.51 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.68 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.76 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.58 | MC |
| SRR5126153 | root | "mock,7_days" | 1.13 | MC |
| SRR5126155 | root | "mock,7_days" | 1.67 | MC |
| SRR5126157 | root | "mock,7_days" | 2.06 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.54 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.14 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.26 | MC |
| SRR5126165 | root | "mock,14_days" | 1.47 | MC |
| SRR5126167 | root | "mock,14_days" | 1.04 | MC |
| SRR5126169 | root | "mock,14_days" | 1.86 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.48 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.29 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.45 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.10 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.82 | MC |
| SRR1213694 | root | wt | 0.69 | MC |
| SRR1213695 | root | wt | 0.17 | MC |
| SRR4947480 | root | control | 2.76 | MC |
| SRR4947481 | root | control | 3.00 | MC |
| SRR4947484 | root | Al | 2.21 | MC |
| SRR4947485 | root | Al | 2.76 | MC |
| SRR4947488 | root | control | 3.51 | MC |
| SRR4947489 | root | control | 3.10 | MC |
| SRR4947492 | root | Al | 2.80 | MC |
| SRR4947493 | root | Al | 2.89 | MC |
| SRR4947497 | root | control | 2.57 | MC |
| SRR4947500 | root | Al | 2.40 | MC |
| SRR4947501 | root | Al | 1.96 | MC |
| SRR4947504 | root | control | 2.70 | MC |
| SRR4947505 | root | control | 1.82 | MC |
| SRR4947508 | root | Al | 2.05 | MC |
| SRR4947509 | root | Al | 2.59 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.27 | MC |
| SRR6502092 | root | 100 mM NaCl | 1.00 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.51 | MC |
| SRR6502094 | root | control | 1.44 | MC |
| SRR6502095 | root | control | 0.77 | MC |
| SRR6502096 | root | control | 0.67 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.17 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.13 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.75 | MC |
| SRR6502106 | root | control | 0.84 | MC |
| SRR6502107 | root | control | 0.61 | MC |
| SRR6502108 | root | control | 0.72 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.58 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.47 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.27 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.45 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.33 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.55 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.36 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.58 | MC |
| SRR6441554 | seedling | wild_type | 0.67 | MC |
| SRR6441555 | seedling | wild_type | 0.60 | MC |
| SRR2154086 | seedling | wt | 0.62 | MC |
| SRR2154085 | seedling | wt | 0.52 | MC |
| SRR3098743 | seedling | wt | 0.15 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.38 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.38 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.48 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.66 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.65 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.65 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.95 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.43 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.96 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.28 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.65 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.55 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.53 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.78 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.34 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.75 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.67 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.44 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.81 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.79 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.34 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.35 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.81 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.83 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.82 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.52 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.91 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.89 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.16 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.75 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.74 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.76 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.71 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.74 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.60 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.77 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.94 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.05 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.99 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.43 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.95 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.03 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.70 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.49 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.71 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.23 | MC |