| SRR3745125 | anther | wt | 0.97 | MC |
| SRR3745126 | anther | wt | 1.07 | MC |
| SRR3745127 | anther | wt | 1.25 | MC |
| SRR358795 | callus | wt | 1.06 | MC |
| SRR5560727 | caryopsis | wild_type | 0.33 | MC |
| SRR5560728 | caryopsis | wild_type | 0.56 | MC |
| SRR5560729 | caryopsis | wild_type | 0.80 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.60 | MC |
| SRR7265400 | coleoptile | 2dA | 0.46 | MC |
| SRR7265401 | coleoptile | 2dA | 0.48 | MC |
| SRR7265402 | coleoptile | 2dA | 0.78 | MC |
| SRR7265403 | coleoptile | 2dN | 0.48 | MC |
| SRR7265404 | coleoptile | 2dN | 0.52 | MC |
| SRR7265405 | coleoptile | 2dN | 0.32 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.45 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.95 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.51 | MC |
| SRR7265388 | embryo | 12hA | 1.08 | MC |
| SRR7265389 | embryo | 12hA | 1.09 | MC |
| SRR7265390 | embryo | 12hA | 0.76 | MC |
| SRR7265391 | embryo | 12hN | 0.51 | MC |
| SRR7265392 | embryo | 12hN | 0.92 | MC |
| SRR7265393 | embryo | 12hN | 0.64 | MC |
| SRR7265395 | embryo | 24hA | 0.76 | MC |
| SRR7265396 | embryo | 24hA | 0.82 | MC |
| SRR7265397 | embryo | 24hN | 0.50 | MC |
| SRR7265398 | embryo | 24hN | 0.54 | MC |
| SRR7265399 | embryo | 24hN | 0.79 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.65 | MC |
| SRR1213691 | flower | wt | 0.63 | MC |
| SRR8240818 | leaf | wild_type | 0.24 | MC |
| SRR8240819 | leaf | wild_type | 0.42 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.49 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.43 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.24 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.47 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.43 | MC |
| SRR6168973 | leaf | none (control) | 0.85 | MC |
| SRR6168974 | leaf | none (control) | 0.95 | MC |
| SRR6168975 | leaf | none (control) | 0.33 | MC |
| SRR1633182 | panicle | WT | 2.18 | MC |
| SRR1633185 | panicle | WT | 2.15 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.48 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.50 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.57 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.65 | MC |
| SRR5126147 | root | "mock,1_day" | 0.51 | MC |
| SRR5126148 | root | "mock,1_day" | 0.73 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.54 | MC |
| SRR5126153 | root | "mock,7_days" | 0.59 | MC |
| SRR5126155 | root | "mock,7_days" | 0.31 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.53 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.42 | MC |
| SRR5126169 | root | "mock,14_days" | 0.41 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.33 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.41 | MC |
| SRR1213695 | root | wt | 0.32 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.46 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.48 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.52 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.68 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.32 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.28 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.68 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.60 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.13 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.80 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.53 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.40 | MC |
| SRR2154082 | seedling | wt | 0.29 | MC |
| SRR2154084 | seedling | wt | 0.56 | MC |
| SRR2154087 | seedling | wt | 0.40 | MC |
| SRR3098743 | seedling | wt | 0.18 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.54 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.26 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.60 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.83 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.34 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.34 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.20 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.21 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.50 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.91 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.04 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.67 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.82 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.22 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.09 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.25 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.96 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.38 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.40 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.74 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.84 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.62 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.61 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 0.99 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 0.79 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.09 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.13 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.83 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.88 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.25 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.86 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.12 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.37 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.01 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.65 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.45 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.71 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.57 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.35 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.43 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.33 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.36 | MC |