| SRR4457254 | 2nd_leaf | DAH12 | 0.27 | MC |
| SRR6320473 | carpel | wt | 3.43 | MC |
| SRR6320498 | carpel | wt | 3.40 | MC |
| SRR5560727 | caryopsis | wild_type | 2.15 | MC |
| SRR5560728 | caryopsis | wild_type | 0.56 | MC |
| SRR5560729 | caryopsis | wild_type | 1.33 | MC |
| SRR4947495 | root | control | 2.35 | MC |
| SRR7265403 | coleoptile | 2dN | 1.42 | MC |
| SRR7265404 | coleoptile | 2dN | 0.85 | MC |
| SRR7265405 | coleoptile | 2dN | 0.92 | MC |
| SRR7265407 | coleoptile | 3dA | 0.26 | MC |
| SRR7265408 | coleoptile | 3dA | 0.50 | MC |
| SRR7265409 | coleoptile | 3dN | 0.68 | MC |
| SRR7265410 | coleoptile | 3dN | 0.43 | MC |
| SRR7265411 | coleoptile | 3dN | 0.62 | MC |
| SRR7265415 | coleoptile | 4dN | 0.97 | MC |
| SRR7265416 | coleoptile | 4dN | 0.98 | MC |
| SRR7265417 | coleoptile | 4dN | 0.71 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.81 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.45 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.69 | MC |
| SRR7265374 | embryo | dry seed 0 h | 4.05 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.63 | MC |
| SRR7265376 | embryo | 1hA | 1.86 | MC |
| SRR7265377 | embryo | 1hA | 1.37 | MC |
| SRR7265378 | embryo | 1hA | 2.46 | MC |
| SRR7265379 | embryo | 1hN | 2.34 | MC |
| SRR7265380 | embryo | 1hN | 1.70 | MC |
| SRR7265381 | embryo | 1hN | 1.57 | MC |
| SRR7265382 | embryo | 3hA | 2.18 | MC |
| SRR7265383 | embryo | 3hA | 1.35 | MC |
| SRR7265384 | embryo | 3hA | 2.00 | MC |
| SRR7265385 | embryo | 3hN | 1.80 | MC |
| SRR7265386 | embryo | 3hN | 1.39 | MC |
| SRR7265387 | embryo | 3hN | 1.15 | MC |
| SRR7265390 | embryo | 12hA | 0.73 | MC |
| SRR7265391 | embryo | 12hN | 0.79 | MC |
| SRR7265392 | embryo | 12hN | 1.60 | MC |
| SRR7265397 | embryo | 24hN | 1.17 | MC |
| SRR7265398 | embryo | 24hN | 0.89 | MC |
| SRR7265399 | embryo | 24hN | 1.18 | MC |
| SRR2338867 | endosprem | control | 0.71 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.27 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.83 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.63 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.87 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.61 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.53 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.35 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.71 | MC |
| SRR1213691 | flower | wt | 0.80 | MC |
| SRR8060837 | leaf | wild_type | 0.42 | MC |
| SRR8240825 | leaf | wild_type | 0.32 | MC |
| SRR8240820 | leaf | wild_type | 0.32 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.41 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.58 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.37 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.66 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.44 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.42 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.37 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.41 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.60 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.74 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.56 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.69 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.65 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.86 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.34 | MC |
| SRR1213693 | leaf | wt | 0.35 | MC |
| SRR5856927 | leaf | control | 0.63 | MC |
| SRR5856928 | leaf | control | 1.72 | MC |
| SRR5856929 | leaf | control | 1.21 | MC |
| SRR5856930 | leaf | salt | 0.25 | MC |
| SRR5856933 | leaf | control | 0.39 | MC |
| SRR5856935 | leaf | control | 0.37 | MC |
| SRR5856936 | leaf | salt | 0.32 | MC |
| SRR5856937 | leaf | salt | 0.14 | MC |
| SRR5856938 | leaf | salt | 0.20 | MC |
| SRR6168979 | leaf | none (control) | 0.47 | MC |
| SRR5110432 | panicle | Dawn | 1.39 | MC |
| SRR4947496 | root | control | 1.30 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.70 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.22 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.62 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.91 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.00 | MC |
| SRR5110445 | panicle | Dusk | 1.54 | MC |
| SRR5110446 | panicle | Dusk | 0.89 | MC |
| SRR5110447 | panicle | Dusk | 0.98 | MC |
| SRR5110448 | panicle | Dusk | 0.93 | MC |
| SRR5110449 | panicle | Dawn + 14h | 4.98 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.59 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.75 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.27 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 2.47 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.77 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.02 | MC |
| SRR5110459 | panicle | Dawn + 21h | 1.84 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.45 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.22 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.29 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.44 | MC |
| SRR5126153 | root | "mock,7_days" | 0.30 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.28 | MC |
| SRR1213695 | root | wt | 0.56 | MC |
| SRR4947478 | root | control | 1.12 | MC |
| SRR4947479 | root | control | 1.00 | MC |
| SRR4947481 | root | control | 0.58 | MC |
| SRR4947482 | root | Al | 2.06 | MC |
| SRR4947483 | root | Al | 1.05 | MC |
| SRR4947485 | root | Al | 1.36 | MC |
| SRR4947487 | root | control | 2.09 | MC |
| SRR4947489 | root | control | 0.58 | MC |
| SRR4947490 | root | Al | 2.59 | MC |
| SRR4947491 | root | Al | 1.56 | MC |
| SRR4947493 | root | Al | 0.51 | MC |
| SRR4947494 | root | control | 2.07 | MC |
| SRR4947497 | root | control | 0.91 | MC |
| SRR4947498 | root | Al | 1.96 | MC |
| SRR4947499 | root | Al | 1.12 | MC |
| SRR4947500 | root | Al | 1.24 | MC |
| SRR4947501 | root | Al | 1.71 | MC |
| SRR4947502 | root | control | 2.25 | MC |
| SRR4947505 | root | control | 1.11 | MC |
| SRR4947506 | root | Al | 0.53 | MC |
| SRR4947507 | root | Al | 2.09 | MC |
| SRR4947509 | root | Al | 1.11 | MC |
| SRR3098741 | seedling | wt | 0.35 | MC |
| SRR3098743 | seedling | wt | 0.19 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.40 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.44 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.63 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.11 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.39 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.36 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.28 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.57 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.32 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.51 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.79 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.39 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.38 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.27 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.68 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.24 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.40 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.48 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.72 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.63 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.53 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.86 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.51 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.24 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.56 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.22 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.21 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 3.16 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.62 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.35 | MC |