| SRR6320473 | carpel | wt | 1.12 | MC |
| SRR6320498 | carpel | wt | 1.31 | MC |
| SRR5560727 | caryopsis | wild_type | 0.28 | MC |
| SRR5560728 | caryopsis | wild_type | 0.80 | MC |
| SRR5560729 | caryopsis | wild_type | 0.96 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.53 | MC |
| SRR7265400 | coleoptile | 2dA | 0.30 | MC |
| SRR7265401 | coleoptile | 2dA | 0.45 | MC |
| SRR7265402 | coleoptile | 2dA | 0.32 | MC |
| SRR7265403 | coleoptile | 2dN | 0.49 | MC |
| SRR7265405 | coleoptile | 2dN | 0.38 | MC |
| SRR7265409 | coleoptile | 3dN | 0.41 | MC |
| SRR7265410 | coleoptile | 3dN | 0.39 | MC |
| SRR7265411 | coleoptile | 3dN | 0.43 | MC |
| SRR7265415 | coleoptile | 4dN | 0.63 | MC |
| SRR7265416 | coleoptile | 4dN | 0.79 | MC |
| SRR7265417 | coleoptile | 4dN | 0.90 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.40 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.37 | MC |
| SRR7265393 | embryo | 12hN | 0.52 | MC |
| SRR7265395 | embryo | 24hA | 0.51 | MC |
| SRR7265398 | embryo | 24hN | 0.51 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.87 | MC |
| SRR1213691 | flower | wt | 2.25 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.45 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.26 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.04 | MC |
| SRR6168973 | leaf | none (control) | 0.97 | MC |
| SRR6168974 | leaf | none (control) | 0.91 | MC |
| SRR6168975 | leaf | none (control) | 0.44 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.68 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.28 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.18 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.33 | MC |
| SRR8582889 | panicle | AM | 0.24 | MC |
| SRR8582890 | panicle | AM | 0.41 | MC |
| SRR8582892 | panicle | PM | 0.73 | MC |
| SRR8582893 | panicle | PM | 0.51 | MC |
| SRR5110429 | panicle | Dawn | 0.38 | MC |
| SRR5110430 | panicle | Dawn | 0.62 | MC |
| SRR5110431 | panicle | Dawn | 0.93 | MC |
| SRR5110432 | panicle | Dawn | 0.60 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.05 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.70 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.60 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.70 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.09 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.52 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.56 | MC |
| SRR5110445 | panicle | Dusk | 0.95 | MC |
| SRR5110446 | panicle | Dusk | 0.65 | MC |
| SRR5110447 | panicle | Dusk | 0.44 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.63 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.92 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.84 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.69 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.56 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.26 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.32 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.54 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.74 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.47 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.32 | MC |
| SRR5126148 | root | "mock,1_day" | 0.50 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.43 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.47 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.45 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.46 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.37 | MC |
| SRR5126169 | root | "mock,14_days" | 0.39 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.38 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.73 | MC |
| SRR4947501 | root | Al | 0.49 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.25 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.46 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.77 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.52 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.57 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.48 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.36 | MC |
| SRR2154086 | seedling | wt | 0.64 | MC |
| SRR2154083 | seedling | wt | 0.27 | MC |
| SRR2154087 | seedling | wt | 0.47 | MC |
| SRR3098742 | seedling | wt | 0.21 | MC |
| SRR3098743 | seedling | wt | 0.36 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.98 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.78 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.06 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.30 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.34 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.42 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.46 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.33 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.18 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.93 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.31 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.26 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 2.24 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.38 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.21 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.11 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.21 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.16 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.53 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.39 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.02 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.22 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.53 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.09 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.27 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.93 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.20 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.84 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 1.65 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.26 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.77 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.82 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.95 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.18 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.95 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.66 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.87 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.41 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.87 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.64 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.71 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.49 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.87 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.60 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.73 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.60 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.50 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.35 | MC |