| SRR5560729 | caryopsis | wild_type | 0.50 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.87 | MC |
| SRR2338868 | endosprem | high_temperature | 1.16 | MC |
| SRR2338869 | endosprem | high_temperature | 1.83 | MC |
| SRR8240825 | leaf | wild_type | 0.30 | MC |
| SRR8240826 | leaf | wild_type | 0.70 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.28 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.20 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.66 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.67 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.21 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.34 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.44 | MC |
| SRR6417967 | leaf | H2O_control | 0.65 | MC |
| SRR6417968 | leaf | H2O_control | 0.78 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.41 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.26 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.31 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.87 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.57 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.67 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.48 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.41 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.60 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.39 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.60 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.23 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.45 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.36 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.41 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.32 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.65 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.65 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.55 | MC |
| SRR6502089 | leaf | control | 0.33 | MC |
| SRR6502090 | leaf | control | 0.34 | MC |
| SRR6168973 | leaf | none (control) | 0.34 | MC |
| SRR8582888 | panicle | AM | 0.37 | MC |
| SRR8582889 | panicle | AM | 0.55 | MC |
| SRR8582890 | panicle | AM | 0.33 | MC |
| SRR8582893 | panicle | PM | 0.22 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.79 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.42 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.39 | MC |
| SRR5126147 | root | "mock,1_day" | 0.49 | MC |
| SRR5126148 | root | "mock,1_day" | 0.54 | MC |
| SRR5126149 | root | "mock,1_day" | 0.50 | MC |
| SRR5126169 | root | "mock,14_days" | 0.36 | MC |
| SRR1213695 | root | wt | 0.13 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.44 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.56 | MC |
| SRR6502094 | root | control | 0.46 | MC |
| SRR6502096 | root | control | 0.39 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.51 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.30 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.37 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.33 | MC |
| SRR6441554 | seedling | wild_type | 0.58 | MC |
| SRR2154087 | seedling | wt | 0.55 | MC |
| SRR3098741 | seedling | wt | 0.19 | MC |
| SRR3098742 | seedling | wt | 0.22 | MC |
| SRR3098743 | seedling | wt | 0.30 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.38 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.29 | MC |
| SRR1944583 | seedling | no_treatment | 0.69 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.50 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.59 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.10 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.83 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.57 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.69 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.89 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.42 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.45 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.31 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.34 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.35 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.33 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.41 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.37 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.37 | MC |