| SRR5560727 | caryopsis | wild_type | 1.31 | MC |
| SRR5560728 | caryopsis | wild_type | 1.15 | MC |
| SRR5560729 | caryopsis | wild_type | 1.73 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.16 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.22 | MC |
| SRR2338868 | endosprem | high_temperature | 0.48 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.70 | MC |
| SRR1213691 | flower | wt | 0.37 | MC |
| SRR8240824 | leaf | wild_type | 0.86 | MC |
| SRR8240825 | leaf | wild_type | 2.27 | MC |
| SRR8240819 | leaf | wild_type | 0.33 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.87 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.71 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.68 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.54 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.00 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.41 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.62 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.37 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.38 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.85 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.69 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.45 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.45 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.36 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.46 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.43 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.44 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.55 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.46 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.20 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.38 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.24 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.37 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.59 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.56 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.62 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.56 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.62 | MC |
| SRR1761530 | leaf | control | 0.56 | MC |
| SRR1761531 | leaf | control | 0.62 | MC |
| SRR504365 | leaf | wt | 1.41 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.23 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.82 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.68 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.56 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.10 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.52 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.80 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.91 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.89 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.63 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.45 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.22 | MC |
| SRR6502088 | leaf | control | 1.02 | MC |
| SRR6502089 | leaf | control | 2.07 | MC |
| SRR6502090 | leaf | control | 2.48 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.71 | MC |
| SRR6168973 | leaf | none (control) | 1.22 | MC |
| SRR6168975 | leaf | none (control) | 0.53 | MC |
| SRR1633182 | panicle | WT | 0.94 | MC |
| SRR1633185 | panicle | WT | 1.27 | MC |
| SRR1213695 | root | wt | 0.38 | MC |
| SRR4947478 | root | control | 0.69 | MC |
| SRR4947482 | root | Al | 0.45 | MC |
| SRR4947490 | root | Al | 0.89 | MC |
| SRR4947494 | root | control | 0.74 | MC |
| SRR4947498 | root | Al | 1.08 | MC |
| SRR4947502 | root | control | 1.46 | MC |
| SRR4947506 | root | Al | 0.77 | MC |
| SRR4947507 | root | Al | 0.64 | MC |
| SRR6441554 | seedling | wild_type | 2.48 | MC |
| SRR2154082 | seedling | wt | 0.49 | MC |
| SRR2154085 | seedling | wt | 3.01 | MC |
| SRR2154087 | seedling | wt | 2.51 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.65 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.07 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.85 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 3.82 | MC |
| SRR1944583 | seedling | no_treatment | 1.51 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.87 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.21 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.99 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.97 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.57 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.72 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.47 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.98 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.45 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.26 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.42 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.28 | MC |