| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.68 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.50 | MC |
| SRR7265400 | coleoptile | 2dA | 0.75 | MC |
| SRR7265401 | coleoptile | 2dA | 0.57 | MC |
| SRR7265402 | coleoptile | 2dA | 0.71 | MC |
| SRR7265413 | coleoptile | 4dA | 0.59 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.81 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.62 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 4.31 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.62 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 4.34 | MC |
| SRR1761530 | leaf | control | 2.67 | MC |
| SRR1761531 | leaf | control | 4.31 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.34 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.23 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.81 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.82 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.78 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.95 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.10 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.80 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.06 | MC |
| SRR1213692 | leaf | wt | 0.34 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.74 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.05 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.48 | MC |
| SRR6502088 | leaf | control | 0.89 | MC |
| SRR6502089 | leaf | control | 1.17 | MC |
| SRR6502090 | leaf | control | 0.32 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 4.31 | MC |
| SRR6502100 | leaf | control | 0.37 | MC |
| SRR6502102 | leaf | control | 0.51 | MC |
| SRR6168973 | leaf | none (control) | 0.57 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 4.13 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.83 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.85 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.30 | MC |
| SRR1633185 | panicle | WT | 0.44 | MC |
| SRR5126147 | root | "mock,1_day" | 0.54 | MC |
| SRR5126149 | root | "mock,1_day" | 1.87 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.20 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.38 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.69 | MC |
| SRR5126155 | root | "mock,7_days" | 0.29 | MC |
| SRR5126157 | root | "mock,7_days" | 0.61 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.86 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.61 | MC |
| SRR5126165 | root | "mock,14_days" | 3.09 | MC |
| SRR5126167 | root | "mock,14_days" | 1.02 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.51 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.30 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.35 | MC |
| SRR6502094 | root | control | 2.61 | MC |
| SRR6502095 | root | control | 2.89 | MC |
| SRR6502096 | root | control | 2.11 | MC |
| SRR6502107 | root | control | 3.71 | MC |
| SRR6502108 | root | control | 4.12 | MC |
| SRR2154086 | seedling | wt | 0.93 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.70 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.61 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.79 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.67 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.09 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.95 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.43 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.94 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.20 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.78 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.97 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.41 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.30 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.57 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.80 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.34 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.37 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.46 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.62 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.29 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.08 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 2.84 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.99 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.15 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.28 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.73 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.46 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.90 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 5.17 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 7.17 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 5.75 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.58 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.48 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.37 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.85 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.77 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.84 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 3.39 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.59 | MC |