| SRR4457266 | 2nd_leaf | DAH44 | 0.87 | MC |
| SRR5560728 | caryopsis | wild_type | 4.32 | MC |
| SRR5560729 | caryopsis | wild_type | 2.13 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.38 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.79 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.97 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.19 | MC |
| SRR2338867 | endosprem | control | 0.51 | MC |
| SRR2338868 | endosprem | high_temperature | 0.77 | MC |
| SRR2338869 | endosprem | high_temperature | 0.97 | MC |
| SRR1213690 | flower | wt(flower buds) | 3.03 | MC |
| SRR1213691 | flower | wt | 1.06 | MC |
| SRR8240826 | leaf | wild_type | 0.40 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.20 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.89 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.13 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.92 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.70 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.05 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.18 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.30 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.97 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.16 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.46 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.54 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.19 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.04 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.86 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.88 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.34 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.65 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.36 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.36 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.32 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.96 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.33 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.23 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.57 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.52 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.94 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.20 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.05 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.24 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.67 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.18 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.93 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.43 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.66 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.34 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.54 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.90 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 4.32 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.72 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.00 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.72 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.00 | MC |
| SRR1761530 | leaf | control | 1.72 | MC |
| SRR1761531 | leaf | control | 1.00 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.56 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.44 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.34 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.31 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.70 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.50 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.75 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.40 | MC |
| SRR5126147 | root | "mock,1_day" | 1.93 | MC |
| SRR5126148 | root | "mock,1_day" | 2.24 | MC |
| SRR5126149 | root | "mock,1_day" | 3.71 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.11 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.94 | MC |
| SRR5126153 | root | "mock,7_days" | 1.23 | MC |
| SRR5126157 | root | "mock,7_days" | 3.09 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.98 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.42 | MC |
| SRR5126165 | root | "mock,14_days" | 2.49 | MC |
| SRR5126167 | root | "mock,14_days" | 0.42 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.89 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.66 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.54 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.69 | MC |
| SRR1213694 | root | wt | 0.30 | MC |
| SRR3098741 | seedling | wt | 1.05 | MC |
| SRR3098742 | seedling | wt | 1.05 | MC |
| SRR3098743 | seedling | wt | 1.14 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.83 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.21 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.25 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.54 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.47 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.51 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.22 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.88 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.17 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.17 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.65 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.31 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.03 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.38 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.67 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.44 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.39 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.38 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.99 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 0.93 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.75 | MC |