| SRR358795 | callus | wt | 7.91 | MC |
| SRR358796 | callus | wt | 4.39 | MC |
| SRR358798 | callus | wt | 8.90 | MC |
| SRR6320473 | carpel | wt | 2.38 | MC |
| SRR5560727 | caryopsis | wild_type | 1.15 | MC |
| SRR5560728 | caryopsis | wild_type | 0.84 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.72 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.24 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.47 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.01 | MC |
| SRR7265400 | coleoptile | 2dA | 3.11 | MC |
| SRR7265401 | coleoptile | 2dA | 2.66 | MC |
| SRR7265402 | coleoptile | 2dA | 2.20 | MC |
| SRR7265406 | coleoptile | 3dA | 1.26 | MC |
| SRR7265407 | coleoptile | 3dA | 0.91 | MC |
| SRR7265408 | coleoptile | 3dA | 0.57 | MC |
| SRR7265413 | coleoptile | 4dA | 4.26 | MC |
| SRR7265414 | coleoptile | 4dA | 1.84 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.98 | MC |
| SRR7265388 | embryo | 12hA | 2.32 | MC |
| SRR7265389 | embryo | 12hA | 2.99 | MC |
| SRR7265390 | embryo | 12hA | 2.79 | MC |
| SRR7265392 | embryo | 12hN | 3.10 | MC |
| SRR7265393 | embryo | 12hN | 4.01 | MC |
| SRR7265394 | embryo | 24hA | 2.65 | MC |
| SRR7265395 | embryo | 24hA | 3.91 | MC |
| SRR7265396 | embryo | 24hA | 3.05 | MC |
| SRR7265397 | embryo | 24hN | 4.82 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.19 | MC |
| SRR1213691 | flower | wt | 0.46 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.95 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.93 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.68 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.78 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.63 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.51 | MC |
| SRR6168973 | leaf | none (control) | 1.59 | MC |
| SRR6168974 | leaf | none (control) | 2.46 | MC |
| SRR6168975 | leaf | none (control) | 0.40 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 6.34 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.31 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.53 | MC |
| SRR5110429 | panicle | Dawn | 0.55 | MC |
| SRR5110430 | panicle | Dawn | 1.23 | MC |
| SRR5110431 | panicle | Dawn | 0.72 | MC |
| SRR5110432 | panicle | Dawn | 2.77 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.02 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.50 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.04 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.55 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.63 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.66 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.96 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 0.82 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.52 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.76 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.01 | MC |
| SRR5110445 | panicle | Dusk | 0.56 | MC |
| SRR5110446 | panicle | Dusk | 1.48 | MC |
| SRR5110447 | panicle | Dusk | 2.22 | MC |
| SRR5110448 | panicle | Dusk | 1.07 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.65 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.68 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.65 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.55 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.93 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.58 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.67 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.31 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.80 | MC |
| SRR5110459 | panicle | Dawn + 21h | 1.59 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.68 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.26 | MC |
| SRR1633182 | panicle | WT | 3.56 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.52 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.86 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.82 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.24 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.67 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 3.08 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.51 | MC |
| SRR2154086 | seedling | wt | 1.36 | MC |
| SRR2154082 | seedling | wt | 0.71 | MC |
| SRR2154083 | seedling | wt | 1.42 | MC |
| SRR2154084 | seedling | wt | 1.12 | MC |
| SRR2154085 | seedling | wt | 1.55 | MC |
| SRR2154087 | seedling | wt | 0.74 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.93 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.12 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.29 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.58 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.45 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.54 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.09 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.16 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.46 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.48 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.79 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.50 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.69 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.53 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.11 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 4.11 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 3.44 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 3.36 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.53 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 2.51 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.61 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 2.77 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.23 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 3.69 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 2.82 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 2.72 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.76 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 2.40 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 2.85 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 2.28 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 3.59 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.90 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 2.47 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.58 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.47 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.74 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.04 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 2.74 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.93 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.27 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 2.76 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.30 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 3.95 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 3.41 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.21 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.45 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.08 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.39 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.05 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.13 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.45 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.50 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.41 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.88 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.43 | MC |