| SRR4457251 | 2nd_leaf | DAH4 | 0.26 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.73 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.52 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.70 | MC |
| SRR3745126 | anther | wt | 2.73 | MC |
| SRR3745127 | anther | wt | 4.15 | MC |
| SRR5560727 | caryopsis | wild_type | 0.57 | MC |
| SRR5560728 | caryopsis | wild_type | 0.50 | MC |
| SRR5560729 | caryopsis | wild_type | 1.02 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.50 | MC |
| SRR7265400 | coleoptile | 2dA | 0.98 | MC |
| SRR7265401 | coleoptile | 2dA | 0.65 | MC |
| SRR7265402 | coleoptile | 2dA | 0.34 | MC |
| SRR7265403 | coleoptile | 2dN | 3.62 | MC |
| SRR7265404 | coleoptile | 2dN | 3.18 | MC |
| SRR7265405 | coleoptile | 2dN | 2.97 | MC |
| SRR7265407 | coleoptile | 3dA | 0.59 | MC |
| SRR7265408 | coleoptile | 3dA | 0.62 | MC |
| SRR7265412 | coleoptile | 4dA | 1.32 | MC |
| SRR7265413 | coleoptile | 4dA | 1.89 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.19 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.48 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.42 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.61 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.50 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.02 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.91 | MC |
| SRR7265373 | embryo | dry seed 0 h | 3.17 | MC |
| SRR7265374 | embryo | dry seed 0 h | 4.31 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.01 | MC |
| SRR7265376 | embryo | 1hA | 2.86 | MC |
| SRR7265377 | embryo | 1hA | 2.73 | MC |
| SRR7265379 | embryo | 1hN | 3.25 | MC |
| SRR7265380 | embryo | 1hN | 1.69 | MC |
| SRR7265381 | embryo | 1hN | 2.60 | MC |
| SRR7265382 | embryo | 3hA | 2.80 | MC |
| SRR7265383 | embryo | 3hA | 3.18 | MC |
| SRR7265384 | embryo | 3hA | 2.74 | MC |
| SRR7265385 | embryo | 3hN | 3.40 | MC |
| SRR7265386 | embryo | 3hN | 2.40 | MC |
| SRR7265387 | embryo | 3hN | 2.53 | MC |
| SRR7265388 | embryo | 12hA | 0.51 | MC |
| SRR7265389 | embryo | 12hA | 1.27 | MC |
| SRR7265390 | embryo | 12hA | 0.58 | MC |
| SRR7265391 | embryo | 12hN | 1.68 | MC |
| SRR7265392 | embryo | 12hN | 2.29 | MC |
| SRR7265393 | embryo | 12hN | 2.09 | MC |
| SRR7265394 | embryo | 24hA | 1.13 | MC |
| SRR7265395 | embryo | 24hA | 1.24 | MC |
| SRR7265396 | embryo | 24hA | 0.97 | MC |
| SRR7265397 | embryo | 24hN | 3.36 | MC |
| SRR7265398 | embryo | 24hN | 2.50 | MC |
| SRR7265399 | embryo | 24hN | 3.23 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.29 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.45 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.58 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.34 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.48 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.28 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.38 | MC |
| SRR1213691 | flower | wt | 0.41 | MC |
| SRR8060836 | leaf | wild_type | 0.37 | MC |
| SRR8240820 | leaf | wild_type | 0.71 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.44 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.17 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.37 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.62 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.17 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.44 | MC |
| SRR6417968 | leaf | H2O_control | 0.48 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.59 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.77 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.34 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.77 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.26 | MC |
| SRR1213692 | leaf | wt | 0.51 | MC |
| SRR1213693 | leaf | wt | 0.77 | MC |
| SRR5856933 | leaf | control | 0.21 | MC |
| SRR5856934 | leaf | control | 0.21 | MC |
| SRR6168973 | leaf | none (control) | 0.34 | MC |
| SRR8582889 | panicle | AM | 0.21 | MC |
| SRR8582890 | panicle | AM | 0.30 | MC |
| SRR5110429 | panicle | Dawn | 1.23 | MC |
| SRR5110431 | panicle | Dawn | 0.35 | MC |
| SRR4947496 | root | control | 0.50 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.34 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 0.79 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.55 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.51 | MC |
| SRR5110447 | panicle | Dusk | 0.85 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.54 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.68 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.80 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.72 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.84 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.46 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.56 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.63 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.78 | MC |
| SRR5126147 | root | "mock,1_day" | 0.78 | MC |
| SRR5126148 | root | "mock,1_day" | 0.86 | MC |
| SRR5126149 | root | "mock,1_day" | 0.96 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.61 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.78 | MC |
| SRR5126153 | root | "mock,7_days" | 0.61 | MC |
| SRR5126155 | root | "mock,7_days" | 1.31 | MC |
| SRR5126157 | root | "mock,7_days" | 1.99 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.78 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.19 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 3.21 | MC |
| SRR5126165 | root | "mock,14_days" | 2.19 | MC |
| SRR5126167 | root | "mock,14_days" | 0.88 | MC |
| SRR5126169 | root | "mock,14_days" | 1.81 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.18 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.69 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.24 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.77 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.31 | MC |
| SRR1213694 | root | wt | 0.32 | MC |
| SRR1213695 | root | wt | 1.01 | MC |
| SRR4947480 | root | control | 0.60 | MC |
| SRR4947484 | root | Al | 0.52 | MC |
| SRR4947488 | root | control | 0.61 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.78 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.38 | MC |
| SRR6502106 | root | control | 1.21 | MC |
| SRR6502107 | root | control | 0.95 | MC |
| SRR6502108 | root | control | 0.94 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.92 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.34 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.32 | MC |
| SRR6441555 | seedling | wild_type | 0.26 | MC |
| SRR2154087 | seedling | wt | 0.41 | MC |
| SRR3098741 | seedling | wt | 0.20 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.70 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.40 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.12 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.51 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.28 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.32 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.38 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.96 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.07 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.38 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.34 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.54 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.36 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.60 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.39 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.39 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.68 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.37 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.33 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.45 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.55 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.42 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.23 | MC |