| SRR358795 | callus | wt | 1.92 | MC |
| SRR358796 | callus | wt | 1.80 | MC |
| SRR358797 | callus | wt | 1.42 | MC |
| SRR358798 | callus | wt | 1.08 | MC |
| SRR5560727 | caryopsis | wild_type | 0.59 | MC |
| SRR5560728 | caryopsis | wild_type | 0.29 | MC |
| SRR5560729 | caryopsis | wild_type | 0.84 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.05 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.11 | MC |
| SRR7265400 | coleoptile | 2dA | 1.29 | MC |
| SRR7265402 | coleoptile | 2dA | 1.22 | MC |
| SRR7265403 | coleoptile | 2dN | 0.72 | MC |
| SRR7265404 | coleoptile | 2dN | 1.12 | MC |
| SRR7265405 | coleoptile | 2dN | 0.98 | MC |
| SRR7265406 | coleoptile | 3dA | 2.11 | MC |
| SRR7265407 | coleoptile | 3dA | 1.33 | MC |
| SRR7265408 | coleoptile | 3dA | 1.51 | MC |
| SRR7265409 | coleoptile | 3dN | 1.96 | MC |
| SRR7265410 | coleoptile | 3dN | 1.80 | MC |
| SRR7265411 | coleoptile | 3dN | 1.77 | MC |
| SRR7265413 | coleoptile | 4dA | 1.02 | MC |
| SRR7265415 | coleoptile | 4dN | 0.86 | MC |
| SRR7265416 | coleoptile | 4dN | 0.93 | MC |
| SRR7265417 | coleoptile | 4dN | 2.05 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.60 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.33 | MC |
| SRR7265390 | embryo | 12hA | 0.68 | MC |
| SRR7265391 | embryo | 12hN | 0.81 | MC |
| SRR7265392 | embryo | 12hN | 1.18 | MC |
| SRR7265393 | embryo | 12hN | 0.48 | MC |
| SRR7265395 | embryo | 24hA | 1.56 | MC |
| SRR7265396 | embryo | 24hA | 0.79 | MC |
| SRR7265397 | embryo | 24hN | 1.42 | MC |
| SRR7265398 | embryo | 24hN | 1.21 | MC |
| SRR7265399 | embryo | 24hN | 0.97 | MC |
| SRR2338866 | endosprem | control | 1.29 | MC |
| SRR2338868 | endosprem | high_temperature | 0.50 | MC |
| SRR2338869 | endosprem | high_temperature | 1.06 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.98 | MC |
| SRR1213691 | flower | wt | 1.93 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.97 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.66 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.59 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.23 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.47 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.77 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.74 | MC |
| SRR6168975 | leaf | none (control) | 3.31 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.83 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.59 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.25 | MC |
| SRR5110429 | panicle | Dawn | 0.44 | MC |
| SRR5110430 | panicle | Dawn | 0.89 | MC |
| SRR5110431 | panicle | Dawn | 1.48 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.57 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.45 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.06 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.78 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.31 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.38 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.75 | MC |
| SRR5110445 | panicle | Dusk | 1.80 | MC |
| SRR5110447 | panicle | Dusk | 0.42 | MC |
| SRR5110448 | panicle | Dusk | 0.94 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.22 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.95 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.39 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.94 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.85 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.44 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.57 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.75 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.12 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.48 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.39 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.01 | MC |
| SRR2154086 | seedling | wt | 0.66 | MC |
| SRR2154085 | seedling | wt | 0.92 | MC |
| SRR3098741 | seedling | wt | 0.33 | MC |
| SRR3098742 | seedling | wt | 0.37 | MC |
| SRR3098743 | seedling | wt | 0.40 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.03 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.64 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.52 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.19 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.44 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.95 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.25 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.71 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.60 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.35 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.78 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.74 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.74 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.63 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.55 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.66 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 4.29 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 2.21 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 2.25 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.88 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.35 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.38 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.58 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 2.04 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.79 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.35 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.97 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.80 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.63 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.37 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 1.07 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.80 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.80 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.76 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.29 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.55 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.35 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.33 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.50 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.09 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.54 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.44 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.44 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.83 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.38 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.58 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.45 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.73 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.89 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.63 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.69 | MC |