| SRR4457251 | 2nd_leaf | DAH4 | 0.35 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.32 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.93 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.30 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.44 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.80 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.63 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.82 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.35 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.38 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.85 | MC |
| SRR5560728 | caryopsis | wild_type | 0.52 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.70 | MC |
| SRR7265403 | coleoptile | 2dN | 0.48 | MC |
| SRR7265405 | coleoptile | 2dN | 0.38 | MC |
| SRR7265411 | coleoptile | 3dN | 0.30 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.81 | MC |
| SRR7265374 | embryo | dry seed 0 h | 4.04 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.75 | MC |
| SRR7265382 | embryo | 3hA | 3.30 | MC |
| SRR7265383 | embryo | 3hA | 3.84 | MC |
| SRR7265384 | embryo | 3hA | 2.75 | MC |
| SRR7265389 | embryo | 12hA | 0.56 | MC |
| SRR7265390 | embryo | 12hA | 0.54 | MC |
| SRR7265392 | embryo | 12hN | 1.07 | MC |
| SRR7265393 | embryo | 12hN | 1.34 | MC |
| SRR2338867 | endosprem | control | 1.07 | MC |
| SRR2338869 | endosprem | high_temperature | 1.58 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.53 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.90 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.10 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.55 | MC |
| SRR4457235 | flag_leaf | DAH12 | 3.24 | MC |
| SRR4457236 | flag_leaf | DAH12 | 3.08 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.51 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.26 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.74 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.27 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.29 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.70 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.67 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.80 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.26 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.64 | MC |
| SRR8060835 | leaf | wild_type | 0.47 | MC |
| SRR8060836 | leaf | wild_type | 0.72 | MC |
| SRR8240818 | leaf | wild_type | 1.75 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.65 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.67 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.93 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.93 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.36 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.44 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.75 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.37 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.89 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.32 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.33 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.68 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.40 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.99 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.34 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.48 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.93 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.35 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.89 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.68 | MC |
| SRR1761528 | leaf | drought | 1.96 | MC |
| SRR1761531 | leaf | control | 2.45 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.72 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.48 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.71 | MC |
| SRR6417967 | leaf | H2O_control | 0.46 | MC |
| SRR6417969 | leaf | H2O_control | 0.79 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.47 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.19 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.78 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.73 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.09 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.80 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.18 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.58 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.65 | MC |
| SRR8582893 | panicle | PM | 1.13 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.64 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.67 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.54 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.21 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.19 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.78 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.38 | MC |
| SRR1213694 | root | wt | 0.47 | MC |
| SRR1213695 | root | wt | 0.21 | MC |
| SRR6441554 | seedling | wild_type | 0.38 | MC |
| SRR2154086 | seedling | wt | 1.50 | MC |
| SRR2154085 | seedling | wt | 1.52 | MC |
| SRR3098741 | seedling | wt | 0.54 | MC |
| SRR3098742 | seedling | wt | 0.67 | MC |
| SRR3098743 | seedling | wt | 0.51 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.93 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.80 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.62 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.28 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.56 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.24 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.91 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.88 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.47 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.56 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.67 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.23 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.74 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.55 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.65 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.39 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.32 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.63 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.29 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.40 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.67 | MC |