| SRR3745125 | anther | wt | 4.38 | MC |
| SRR3745126 | anther | wt | 1.82 | MC |
| SRR3745127 | anther | wt | 2.01 | MC |
| SRR6320498 | carpel | wt | 1.89 | MC |
| SRR5560727 | caryopsis | wild_type | 0.27 | MC |
| SRR5560729 | caryopsis | wild_type | 0.74 | MC |
| SRR4947495 | root | control | 2.72 | MC |
| SRR7265400 | coleoptile | 2dA | 0.32 | MC |
| SRR7265405 | coleoptile | 2dN | 0.48 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.42 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.45 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.11 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.54 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.44 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.20 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.91 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.67 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.63 | MC |
| SRR7265388 | embryo | 12hA | 0.72 | MC |
| SRR7265396 | embryo | 24hA | 0.52 | MC |
| SRR7265398 | embryo | 24hN | 0.49 | MC |
| SRR7265399 | embryo | 24hN | 0.42 | MC |
| SRR2338867 | endosprem | control | 0.45 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.59 | MC |
| SRR1213691 | flower | wt | 0.97 | MC |
| SRR8060835 | leaf | wild_type | 0.50 | MC |
| SRR8060836 | leaf | wild_type | 0.44 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.41 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.47 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.63 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.40 | MC |
| SRR5856928 | leaf | control | 0.63 | MC |
| SRR5856929 | leaf | control | 0.49 | MC |
| SRR5856930 | leaf | salt | 0.50 | MC |
| SRR5856931 | leaf | salt | 0.35 | MC |
| SRR5856932 | leaf | salt | 0.35 | MC |
| SRR5856933 | leaf | control | 1.06 | MC |
| SRR5856934 | leaf | control | 0.47 | MC |
| SRR5856935 | leaf | control | 0.72 | MC |
| SRR5856936 | leaf | salt | 0.57 | MC |
| SRR5856937 | leaf | salt | 0.57 | MC |
| SRR5856938 | leaf | salt | 0.60 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.71 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.46 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.51 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.27 | MC |
| SRR8582889 | panicle | AM | 0.30 | MC |
| SRR8582891 | panicle | PM | 0.48 | MC |
| SRR5110429 | panicle | Dawn | 2.61 | MC |
| SRR5110430 | panicle | Dawn | 1.45 | MC |
| SRR5110431 | panicle | Dawn | 1.76 | MC |
| SRR5110432 | panicle | Dawn | 1.60 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.36 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.41 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.09 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.44 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.86 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.00 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.71 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.18 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 0.95 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.34 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.96 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.98 | MC |
| SRR5110445 | panicle | Dusk | 2.12 | MC |
| SRR5110446 | panicle | Dusk | 3.82 | MC |
| SRR5110447 | panicle | Dusk | 3.30 | MC |
| SRR5110448 | panicle | Dusk | 4.39 | MC |
| SRR5110449 | panicle | Dawn + 14h | 2.04 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.77 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.46 | MC |
| SRR5110452 | panicle | Dawn + 14h | 2.02 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.36 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.96 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.84 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.94 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.65 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.94 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.37 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.43 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.23 | MC |
| SRR1633182 | panicle | WT | 3.90 | MC |
| SRR1633185 | panicle | WT | 5.70 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.25 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.41 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.83 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.17 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.07 | MC |
| SRR4947478 | root | control | 2.20 | MC |
| SRR4947479 | root | control | 1.43 | MC |
| SRR4947482 | root | Al | 2.09 | MC |
| SRR4947483 | root | Al | 1.24 | MC |
| SRR4947487 | root | control | 1.37 | MC |
| SRR4947488 | root | control | 0.88 | MC |
| SRR4947489 | root | control | 0.84 | MC |
| SRR4947490 | root | Al | 2.25 | MC |
| SRR4947491 | root | Al | 2.54 | MC |
| SRR4947494 | root | control | 1.70 | MC |
| SRR4947497 | root | control | 1.11 | MC |
| SRR4947498 | root | Al | 3.82 | MC |
| SRR4947499 | root | Al | 2.29 | MC |
| SRR4947500 | root | Al | 0.80 | MC |
| SRR4947501 | root | Al | 1.26 | MC |
| SRR4947502 | root | control | 3.60 | MC |
| SRR4947503 | root | control | 3.18 | MC |
| SRR4947504 | root | control | 0.53 | MC |
| SRR4947505 | root | control | 1.12 | MC |
| SRR4947506 | root | Al | 2.68 | MC |
| SRR4947507 | root | Al | 3.74 | MC |
| SRR4947508 | root | Al | 0.59 | MC |
| SRR4947509 | root | Al | 0.53 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.47 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.39 | MC |
| SRR6502107 | root | control | 0.67 | MC |
| SRR6502108 | root | control | 0.83 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.24 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.23 | MC |
| SRR2154086 | seedling | wt | 0.73 | MC |
| SRR2154082 | seedling | wt | 2.77 | MC |
| SRR2154083 | seedling | wt | 3.42 | MC |
| SRR2154084 | seedling | wt | 2.78 | MC |
| SRR2154087 | seedling | wt | 0.35 | MC |
| SRR3098743 | seedling | wt | 0.16 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.08 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.95 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.39 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.37 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.61 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.45 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.10 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.98 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.36 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.69 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.27 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 2.37 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.54 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 2.19 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 2.19 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.12 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.57 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.64 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.82 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 2.35 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.90 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 2.13 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 3.36 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 2.80 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.03 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.43 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 1.70 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 2.58 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 3.18 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.29 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.50 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.26 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 3.26 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.80 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 3.52 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.40 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.49 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.87 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.62 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.42 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.08 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.17 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.67 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.34 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.88 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.72 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.60 | MC |