| SRR3745125 | anther | wt | 2.71 | MC |
| SRR3745126 | anther | wt | 1.95 | MC |
| SRR3745127 | anther | wt | 3.52 | MC |
| SRR358795 | callus | wt | 3.88 | MC |
| SRR358796 | callus | wt | 2.87 | MC |
| SRR358797 | callus | wt | 2.75 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.80 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.69 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.78 | MC |
| SRR7265400 | coleoptile | 2dA | 1.10 | MC |
| SRR7265401 | coleoptile | 2dA | 0.98 | MC |
| SRR7265402 | coleoptile | 2dA | 1.19 | MC |
| SRR7265403 | coleoptile | 2dN | 1.81 | MC |
| SRR7265404 | coleoptile | 2dN | 1.34 | MC |
| SRR7265405 | coleoptile | 2dN | 1.67 | MC |
| SRR7265406 | coleoptile | 3dA | 0.66 | MC |
| SRR7265407 | coleoptile | 3dA | 0.76 | MC |
| SRR7265408 | coleoptile | 3dA | 0.45 | MC |
| SRR7265409 | coleoptile | 3dN | 1.60 | MC |
| SRR7265410 | coleoptile | 3dN | 1.66 | MC |
| SRR7265411 | coleoptile | 3dN | 0.97 | MC |
| SRR7265412 | coleoptile | 4dA | 0.42 | MC |
| SRR7265413 | coleoptile | 4dA | 0.95 | MC |
| SRR7265414 | coleoptile | 4dA | 1.08 | MC |
| SRR7265415 | coleoptile | 4dN | 1.52 | MC |
| SRR7265416 | coleoptile | 4dN | 1.44 | MC |
| SRR7265417 | coleoptile | 4dN | 1.06 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.84 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.78 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.03 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.42 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.70 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.60 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.83 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.66 | MC |
| SRR7265377 | embryo | 1hA | 2.80 | MC |
| SRR7265378 | embryo | 1hA | 3.02 | MC |
| SRR7265382 | embryo | 3hA | 2.34 | MC |
| SRR7265383 | embryo | 3hA | 2.13 | MC |
| SRR7265384 | embryo | 3hA | 2.46 | MC |
| SRR7265385 | embryo | 3hN | 3.44 | MC |
| SRR7265388 | embryo | 12hA | 1.44 | MC |
| SRR7265389 | embryo | 12hA | 1.71 | MC |
| SRR7265390 | embryo | 12hA | 2.47 | MC |
| SRR7265391 | embryo | 12hN | 2.43 | MC |
| SRR7265392 | embryo | 12hN | 3.33 | MC |
| SRR7265393 | embryo | 12hN | 2.60 | MC |
| SRR7265394 | embryo | 24hA | 1.37 | MC |
| SRR7265395 | embryo | 24hA | 1.64 | MC |
| SRR7265396 | embryo | 24hA | 1.17 | MC |
| SRR7265397 | embryo | 24hN | 2.33 | MC |
| SRR7265398 | embryo | 24hN | 1.65 | MC |
| SRR7265399 | embryo | 24hN | 2.50 | MC |
| SRR2338866 | endosprem | control | 3.10 | MC |
| SRR2338868 | endosprem | high_temperature | 0.77 | MC |
| SRR2338869 | endosprem | high_temperature | 1.28 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.73 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.20 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.06 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.58 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.45 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.53 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.84 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 4.33 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 4.33 | MC |
| SRR1761531 | leaf | control | 4.33 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.99 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.66 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 4.09 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 4.52 | MC |
| SRR6502088 | leaf | control | 2.50 | MC |
| SRR6502089 | leaf | control | 3.25 | MC |
| SRR6502090 | leaf | control | 1.98 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.81 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.21 | MC |
| SRR6502100 | leaf | control | 2.61 | MC |
| SRR6502101 | leaf | control | 1.60 | MC |
| SRR6502102 | leaf | control | 2.29 | MC |
| SRR8582888 | panicle | AM | 2.27 | MC |
| SRR8582890 | panicle | AM | 1.33 | MC |
| SRR1633182 | panicle | WT | 1.25 | MC |
| SRR1633185 | panicle | WT | 1.55 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 3.40 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.91 | MC |
| SRR5126147 | root | "mock,1_day" | 1.55 | MC |
| SRR5126148 | root | "mock,1_day" | 1.24 | MC |
| SRR5126149 | root | "mock,1_day" | 2.43 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.14 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.11 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.63 | MC |
| SRR5126153 | root | "mock,7_days" | 2.75 | MC |
| SRR5126155 | root | "mock,7_days" | 3.18 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 4.53 | MC |
| SRR5126165 | root | "mock,14_days" | 2.92 | MC |
| SRR5126167 | root | "mock,14_days" | 1.60 | MC |
| SRR5126169 | root | "mock,14_days" | 4.37 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.32 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.86 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.34 | MC |
| SRR1213694 | root | wt | 2.37 | MC |
| SRR4947481 | root | control | 5.72 | MC |
| SRR4947484 | root | Al | 4.68 | MC |
| SRR4947485 | root | Al | 4.79 | MC |
| SRR4947492 | root | Al | 4.87 | MC |
| SRR4947493 | root | Al | 3.65 | MC |
| SRR4947497 | root | control | 4.86 | MC |
| SRR4947500 | root | Al | 2.45 | MC |
| SRR4947501 | root | Al | 2.99 | MC |
| SRR4947504 | root | control | 3.20 | MC |
| SRR4947505 | root | control | 2.94 | MC |
| SRR4947508 | root | Al | 2.25 | MC |
| SRR4947509 | root | Al | 3.52 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.59 | MC |
| SRR6502093 | root | 100 mM NaCl | 2.12 | MC |
| SRR6502094 | root | control | 2.22 | MC |
| SRR6502095 | root | control | 3.17 | MC |
| SRR6502096 | root | control | 1.55 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.88 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.52 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.61 | MC |
| SRR6502106 | root | control | 1.68 | MC |
| SRR6502107 | root | control | 1.00 | MC |
| SRR6502108 | root | control | 0.97 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.39 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.59 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.32 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.87 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.47 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.71 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.58 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.06 | MC |
| SRR3098742 | seedling | wt | 2.85 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.71 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.74 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.61 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.30 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.84 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.73 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.62 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.41 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.85 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.31 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.78 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.85 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.45 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.21 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.82 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.30 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 3.42 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.99 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 4.17 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 3.96 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 4.86 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 6.22 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 4.10 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.37 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 4.58 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 4.50 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 4.32 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.81 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 6.41 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 7.05 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 8.22 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 8.03 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 10.51 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.86 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.23 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.46 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.83 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.34 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.21 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.80 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.19 | MC |