| SRR4457249 | 2nd_leaf | DAH4 | 1.14 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.96 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.11 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.01 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.13 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.92 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.45 | MC |
| SRR5560727 | caryopsis | wild_type | 0.73 | MC |
| SRR5560728 | caryopsis | wild_type | 0.78 | MC |
| SRR5560729 | caryopsis | wild_type | 2.42 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.23 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.82 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.81 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.40 | MC |
| SRR2338866 | endosprem | control | 1.36 | MC |
| SRR976168 | flag_leaf | wild_type | 0.84 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.15 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.58 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.70 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.64 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.52 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.10 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.53 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.51 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.48 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.43 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.60 | MC |
| SRR1213690 | flower | wt(flower buds) | 3.04 | MC |
| SRR8060835 | leaf | wild_type | 2.02 | MC |
| SRR8060836 | leaf | wild_type | 2.48 | MC |
| SRR8060837 | leaf | wild_type | 1.89 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.33 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 2.63 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.49 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.84 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.47 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.47 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.09 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.28 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.32 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.31 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.23 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.41 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.09 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.76 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.94 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.57 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.07 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.55 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.00 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.20 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.85 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.68 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.80 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.51 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.76 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.89 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.91 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.64 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.38 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.43 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.25 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.80 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.57 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.30 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.66 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.74 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.72 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.04 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.68 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.71 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.80 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 5.98 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 4.62 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.71 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.80 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 5.98 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 4.62 | MC |
| SRR1761528 | leaf | drought | 0.71 | MC |
| SRR1761529 | leaf | drought | 1.80 | MC |
| SRR1761530 | leaf | control | 5.98 | MC |
| SRR1761531 | leaf | control | 4.62 | MC |
| SRR504365 | leaf | wt | 2.93 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.43 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.31 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.24 | MC |
| SRR6417967 | leaf | H2O_control | 3.54 | MC |
| SRR6417968 | leaf | H2O_control | 2.08 | MC |
| SRR6417969 | leaf | H2O_control | 2.28 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.24 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.23 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.39 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.66 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.54 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.35 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.97 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.76 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.24 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 3.53 | MC |
| SRR1213692 | leaf | wt | 1.32 | MC |
| SRR1213693 | leaf | wt | 1.26 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.81 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.79 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.07 | MC |
| SRR6502088 | leaf | control | 1.69 | MC |
| SRR6502089 | leaf | control | 1.62 | MC |
| SRR6502090 | leaf | control | 0.78 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.56 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.33 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.83 | MC |
| SRR6502100 | leaf | control | 1.44 | MC |
| SRR6502101 | leaf | control | 1.53 | MC |
| SRR6502102 | leaf | control | 1.20 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 5.49 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.32 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.95 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.25 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.03 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 5.80 | MC |
| SRR6168979 | leaf | none (control) | 0.27 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.19 | MC |
| SRR8582893 | panicle | PM | 0.35 | MC |
| SRR5110429 | panicle | Dawn | 0.61 | MC |
| SRR5110431 | panicle | Dawn | 0.45 | MC |
| SRR5110432 | panicle | Dawn | 0.64 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.64 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.29 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.59 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.45 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.47 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.59 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.57 | MC |
| SRR5110447 | panicle | Dusk | 0.38 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.85 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.41 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.97 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.85 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.68 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.02 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.50 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.00 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.80 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.63 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.28 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.41 | MC |
| SRR1213695 | root | wt | 1.04 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.62 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.80 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.11 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.58 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.88 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.67 | MC |
| SRR2154083 | seedling | wt | 0.82 | MC |
| SRR2154084 | seedling | wt | 0.56 | MC |
| SRR2154085 | seedling | wt | 3.11 | MC |
| SRR3098741 | seedling | wt | 2.61 | MC |
| SRR3098743 | seedling | wt | 1.78 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.13 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.59 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.45 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.06 | MC |
| SRR358791 | seedling | wt | 2.40 | MC |
| SRR358792 | seedling | wt | 1.97 | MC |
| SRR358793 | seedling | wt | 2.06 | MC |
| SRR358794 | seedling | wt | 1.86 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.35 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.17 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.41 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.70 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.57 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.59 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.16 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.53 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.17 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.94 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.07 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 4.05 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.22 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 4.90 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.64 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.90 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.81 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.54 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.36 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.45 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.26 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.47 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.69 | MC |