| SRR4457251 | 2nd_leaf | DAH4 | 0.27 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.29 | MC |
| SRR358795 | callus | wt | 4.31 | MC |
| SRR358796 | callus | wt | 4.76 | MC |
| SRR358797 | callus | wt | 3.66 | MC |
| SRR358798 | callus | wt | 2.49 | MC |
| SRR5560727 | caryopsis | wild_type | 0.64 | MC |
| SRR5560728 | caryopsis | wild_type | 0.44 | MC |
| SRR5560729 | caryopsis | wild_type | 0.42 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.74 | MC |
| SRR7265398 | embryo | 24hN | 0.52 | MC |
| SRR2338868 | endosprem | high_temperature | 1.11 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.63 | MC |
| SRR8240818 | leaf | wild_type | 0.29 | MC |
| SRR8240819 | leaf | wild_type | 0.36 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.94 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.37 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.16 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.19 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.01 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.15 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.47 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.67 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.36 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.14 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.51 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.73 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.91 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.02 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.80 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 4.57 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.97 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.89 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.09 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.42 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.90 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.75 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.57 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.47 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.59 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.44 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.52 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.65 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.78 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.14 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.56 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.79 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.42 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.57 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.83 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.51 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.83 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.51 | MC |
| SRR1761528 | leaf | drought | 1.83 | MC |
| SRR1761529 | leaf | drought | 1.51 | MC |
| SRR6417968 | leaf | H2O_control | 3.14 | MC |
| SRR6417969 | leaf | H2O_control | 3.39 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.37 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.61 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.33 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.05 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.49 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.37 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.81 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.41 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.76 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.53 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.71 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.85 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.50 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.62 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.77 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.14 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.21 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.38 | MC |
| SRR1213693 | leaf | wt | 0.24 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.62 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.61 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.68 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.71 | MC |
| SRR5856937 | leaf | salt | 0.15 | MC |
| SRR6168974 | leaf | none (control) | 0.44 | MC |
| SRR6168975 | leaf | none (control) | 1.38 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.37 | MC |
| SRR6168979 | leaf | none (control) | 0.38 | MC |
| SRR8582889 | panicle | AM | 0.17 | MC |
| SRR8582890 | panicle | AM | 0.45 | MC |
| SRR8582893 | panicle | PM | 0.67 | MC |
| SRR4947496 | root | control | 1.11 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.20 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.04 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.71 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.83 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.58 | MC |
| SRR5126147 | root | "mock,1_day" | 0.43 | MC |
| SRR5126148 | root | "mock,1_day" | 0.48 | MC |
| SRR5126157 | root | "mock,7_days" | 0.68 | MC |
| SRR5126169 | root | "mock,14_days" | 0.36 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.37 | MC |
| SRR1213694 | root | wt | 0.24 | MC |
| SRR1213695 | root | wt | 0.38 | MC |
| SRR4947480 | root | control | 1.59 | MC |
| SRR4947481 | root | control | 1.84 | MC |
| SRR4947485 | root | Al | 1.26 | MC |
| SRR4947488 | root | control | 1.93 | MC |
| SRR4947489 | root | control | 2.51 | MC |
| SRR4947493 | root | Al | 1.29 | MC |
| SRR4947497 | root | control | 1.78 | MC |
| SRR4947500 | root | Al | 1.57 | MC |
| SRR4947501 | root | Al | 1.37 | MC |
| SRR4947504 | root | control | 3.86 | MC |
| SRR4947505 | root | control | 2.61 | MC |
| SRR4947508 | root | Al | 1.53 | MC |
| SRR4947509 | root | Al | 1.92 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.50 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.72 | MC |
| SRR6502094 | root | control | 0.47 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.76 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.43 | MC |
| SRR6502106 | root | control | 0.36 | MC |
| SRR2154086 | seedling | wt | 0.40 | MC |
| SRR2154082 | seedling | wt | 0.97 | MC |
| SRR2154084 | seedling | wt | 1.37 | MC |
| SRR3098741 | seedling | wt | 0.52 | MC |
| SRR3098742 | seedling | wt | 0.43 | MC |
| SRR3098743 | seedling | wt | 2.12 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.49 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.44 | MC |
| SRR1944583 | seedling | no_treatment | 0.57 | MC |
| SRR358791 | seedling | wt | 0.66 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.54 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.89 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.76 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.30 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.92 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.35 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.51 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.66 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.74 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.79 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.25 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.35 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.84 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.25 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.97 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.83 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.35 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.55 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.14 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.27 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.92 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.98 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.90 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.24 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.86 | MC |