| SRR3745125 | anther | wt | 3.58 | MC |
| SRR3745126 | anther | wt | 2.82 | MC |
| SRR3745127 | anther | wt | 3.46 | MC |
| SRR358797 | callus | wt | 1.13 | MC |
| SRR5560727 | caryopsis | wild_type | 0.24 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.76 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.66 | MC |
| SRR7265406 | coleoptile | 3dA | 0.35 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.39 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.43 | MC |
| SRR7265388 | embryo | 12hA | 0.64 | MC |
| SRR7265390 | embryo | 12hA | 0.78 | MC |
| SRR7265395 | embryo | 24hA | 0.48 | MC |
| SRR7265396 | embryo | 24hA | 0.46 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.57 | MC |
| SRR1213691 | flower | wt | 2.15 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.19 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.10 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.05 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.32 | MC |
| SRR5126147 | root | "mock,1_day" | 0.99 | MC |
| SRR5126148 | root | "mock,1_day" | 1.30 | MC |
| SRR5126149 | root | "mock,1_day" | 0.47 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.48 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.77 | MC |
| SRR5126153 | root | "mock,7_days" | 0.71 | MC |
| SRR5126157 | root | "mock,7_days" | 0.81 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.42 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.60 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.66 | MC |
| SRR5126165 | root | "mock,14_days" | 0.50 | MC |
| SRR5126167 | root | "mock,14_days" | 0.55 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.05 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.18 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.74 | MC |
| SRR1213694 | root | wt | 0.33 | MC |
| SRR4947481 | root | control | 1.05 | MC |
| SRR4947492 | root | Al | 0.71 | MC |
| SRR4947501 | root | Al | 0.57 | MC |
| SRR4947509 | root | Al | 0.70 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.40 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.59 | MC |
| SRR6502094 | root | control | 0.76 | MC |
| SRR6502103 | root | 100 mM NaCl | 2.53 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.25 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.16 | MC |
| SRR6502106 | root | control | 0.32 | MC |
| SRR6502107 | root | control | 0.70 | MC |
| SRR6502108 | root | control | 0.82 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.30 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.72 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.02 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.77 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.68 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.21 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.39 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.52 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.44 | MC |
| SRR2154083 | seedling | wt | 0.36 | MC |
| SRR2154084 | seedling | wt | 0.42 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.30 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.93 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.87 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.11 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.43 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.44 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.41 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.30 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.05 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.64 | MC |