| SRR4457258 | 2nd_leaf | DAH28 | 0.23 | MC |
| SRR3745125 | anther | wt | 2.69 | MC |
| SRR3745126 | anther | wt | 0.93 | MC |
| SRR3745127 | anther | wt | 1.42 | MC |
| SRR5560727 | caryopsis | wild_type | 0.62 | MC |
| SRR5560728 | caryopsis | wild_type | 0.42 | MC |
| SRR5560729 | caryopsis | wild_type | 1.01 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.40 | MC |
| SRR7265400 | coleoptile | 2dA | 1.81 | MC |
| SRR7265401 | coleoptile | 2dA | 1.95 | MC |
| SRR7265402 | coleoptile | 2dA | 1.62 | MC |
| SRR7265403 | coleoptile | 2dN | 2.90 | MC |
| SRR7265404 | coleoptile | 2dN | 2.76 | MC |
| SRR7265405 | coleoptile | 2dN | 3.05 | MC |
| SRR7265406 | coleoptile | 3dA | 1.47 | MC |
| SRR7265407 | coleoptile | 3dA | 1.26 | MC |
| SRR7265408 | coleoptile | 3dA | 0.71 | MC |
| SRR7265409 | coleoptile | 3dN | 2.41 | MC |
| SRR7265410 | coleoptile | 3dN | 2.31 | MC |
| SRR7265411 | coleoptile | 3dN | 2.12 | MC |
| SRR7265412 | coleoptile | 4dA | 1.22 | MC |
| SRR7265413 | coleoptile | 4dA | 1.90 | MC |
| SRR7265414 | coleoptile | 4dA | 1.02 | MC |
| SRR7265415 | coleoptile | 4dN | 1.41 | MC |
| SRR7265416 | coleoptile | 4dN | 1.69 | MC |
| SRR7265417 | coleoptile | 4dN | 1.75 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.19 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.04 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.94 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.72 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.42 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.51 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.42 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.09 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.49 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.52 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.27 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.24 | MC |
| SRR7265376 | embryo | 1hA | 1.36 | MC |
| SRR7265377 | embryo | 1hA | 1.20 | MC |
| SRR7265378 | embryo | 1hA | 1.58 | MC |
| SRR7265379 | embryo | 1hN | 1.23 | MC |
| SRR7265380 | embryo | 1hN | 1.30 | MC |
| SRR7265381 | embryo | 1hN | 1.17 | MC |
| SRR7265382 | embryo | 3hA | 1.82 | MC |
| SRR7265383 | embryo | 3hA | 0.97 | MC |
| SRR7265384 | embryo | 3hA | 1.65 | MC |
| SRR7265385 | embryo | 3hN | 1.48 | MC |
| SRR7265386 | embryo | 3hN | 1.33 | MC |
| SRR7265387 | embryo | 3hN | 0.94 | MC |
| SRR7265388 | embryo | 12hA | 4.33 | MC |
| SRR7265389 | embryo | 12hA | 4.24 | MC |
| SRR7265390 | embryo | 12hA | 4.29 | MC |
| SRR7265391 | embryo | 12hN | 3.58 | MC |
| SRR7265392 | embryo | 12hN | 3.51 | MC |
| SRR7265393 | embryo | 12hN | 3.85 | MC |
| SRR7265394 | embryo | 24hA | 3.08 | MC |
| SRR7265395 | embryo | 24hA | 3.69 | MC |
| SRR7265396 | embryo | 24hA | 3.15 | MC |
| SRR7265397 | embryo | 24hN | 4.51 | MC |
| SRR7265398 | embryo | 24hN | 3.81 | MC |
| SRR7265399 | embryo | 24hN | 2.72 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.36 | MC |
| SRR8240820 | leaf | wild_type | 0.21 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.82 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.30 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.74 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.56 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.25 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.30 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.36 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.60 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.18 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.52 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.69 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.57 | MC |
| SRR6417967 | leaf | H2O_control | 0.56 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.35 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.36 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.31 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.25 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.51 | MC |
| SRR5856927 | leaf | control | 0.24 | MC |
| SRR5856932 | leaf | salt | 0.23 | MC |
| SRR5856936 | leaf | salt | 0.12 | MC |
| SRR5856938 | leaf | salt | 0.23 | MC |
| SRR6168981 | leaf | none (control) | 0.24 | MC |
| SRR8582891 | panicle | PM | 0.56 | MC |
| SRR8582893 | panicle | PM | 0.71 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.29 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.60 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.41 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.58 | MC |
| SRR5110448 | panicle | Dusk | 0.63 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.96 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.27 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.35 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.56 | MC |
| SRR1633182 | panicle | WT | 2.01 | MC |
| SRR1633185 | panicle | WT | 5.13 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.38 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.43 | MC |
| SRR5126147 | root | "mock,1_day" | 0.78 | MC |
| SRR5126148 | root | "mock,1_day" | 0.56 | MC |
| SRR5126149 | root | "mock,1_day" | 1.36 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.81 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.99 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.10 | MC |
| SRR5126153 | root | "mock,7_days" | 0.66 | MC |
| SRR5126155 | root | "mock,7_days" | 0.35 | MC |
| SRR5126157 | root | "mock,7_days" | 0.96 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.04 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.65 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.40 | MC |
| SRR5126165 | root | "mock,14_days" | 0.44 | MC |
| SRR5126167 | root | "mock,14_days" | 0.62 | MC |
| SRR5126169 | root | "mock,14_days" | 0.80 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.58 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.27 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.21 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.28 | MC |
| SRR1213694 | root | wt | 0.37 | MC |
| SRR1213695 | root | wt | 0.34 | MC |
| SRR4947481 | root | control | 0.69 | MC |
| SRR4947487 | root | control | 0.58 | MC |
| SRR4947488 | root | control | 0.49 | MC |
| SRR4947489 | root | control | 0.83 | MC |
| SRR4947490 | root | Al | 0.63 | MC |
| SRR4947509 | root | Al | 0.57 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.90 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.87 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.13 | MC |
| SRR6502095 | root | control | 0.38 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.42 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.34 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.21 | MC |
| SRR3098741 | seedling | wt | 0.31 | MC |
| SRR3098743 | seedling | wt | 0.15 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.36 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.16 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.01 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.82 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.65 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.28 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.48 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.56 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.77 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.24 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.29 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.32 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.33 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.29 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.53 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.55 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.43 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.34 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.38 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.45 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.47 | MC |