| SRR4457251 | 2nd_leaf | DAH4 | 0.29 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.49 | MC |
| SRR358795 | callus | wt | 1.79 | MC |
| SRR358796 | callus | wt | 1.82 | MC |
| SRR358797 | callus | wt | 3.10 | MC |
| SRR358798 | callus | wt | 2.33 | MC |
| SRR6320473 | carpel | wt | 1.84 | MC |
| SRR6320498 | carpel | wt | 1.06 | MC |
| SRR7265400 | coleoptile | 2dA | 0.73 | MC |
| SRR7265401 | coleoptile | 2dA | 0.77 | MC |
| SRR7265406 | coleoptile | 3dA | 1.09 | MC |
| SRR7265407 | coleoptile | 3dA | 1.13 | MC |
| SRR7265408 | coleoptile | 3dA | 1.12 | MC |
| SRR7265412 | coleoptile | 4dA | 0.80 | MC |
| SRR7265413 | coleoptile | 4dA | 1.29 | MC |
| SRR7265414 | coleoptile | 4dA | 0.74 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.82 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.57 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.64 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.02 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.06 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.38 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.23 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.07 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.63 | MC |
| SRR7265388 | embryo | 12hA | 0.74 | MC |
| SRR7265389 | embryo | 12hA | 1.05 | MC |
| SRR7265390 | embryo | 12hA | 0.82 | MC |
| SRR7265391 | embryo | 12hN | 1.01 | MC |
| SRR7265392 | embryo | 12hN | 0.49 | MC |
| SRR7265393 | embryo | 12hN | 0.87 | MC |
| SRR2338868 | endosprem | high_temperature | 0.67 | MC |
| SRR2338869 | endosprem | high_temperature | 0.65 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.29 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.28 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.24 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.39 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.34 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.52 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.65 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.70 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.56 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.63 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.40 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.36 | MC |
| SRR8060835 | leaf | wild_type | 0.24 | MC |
| SRR8060836 | leaf | wild_type | 0.33 | MC |
| SRR8060837 | leaf | wild_type | 0.23 | MC |
| SRR8240824 | leaf | wild_type | 0.43 | MC |
| SRR8240826 | leaf | wild_type | 0.22 | MC |
| SRR8240819 | leaf | wild_type | 0.53 | MC |
| SRR8240820 | leaf | wild_type | 0.47 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.87 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.43 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.71 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.87 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.43 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.71 | MC |
| SRR1761528 | leaf | drought | 0.87 | MC |
| SRR1761530 | leaf | control | 0.43 | MC |
| SRR1761531 | leaf | control | 0.71 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.30 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.35 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.81 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.40 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.32 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.50 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.27 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.42 | MC |
| SRR1213692 | leaf | wt | 0.34 | MC |
| SRR1213693 | leaf | wt | 0.29 | MC |
| SRR6502088 | leaf | control | 0.30 | MC |
| SRR8582889 | panicle | AM | 0.11 | MC |
| SRR1633182 | panicle | WT | 0.28 | MC |
| SRR1633185 | panicle | WT | 0.61 | MC |
| SRR5126153 | root | "mock,7_days" | 0.36 | MC |
| SRR5126155 | root | "mock,7_days" | 0.37 | MC |
| SRR5126157 | root | "mock,7_days" | 0.59 | MC |
| SRR5126167 | root | "mock,14_days" | 0.47 | MC |
| SRR5126169 | root | "mock,14_days" | 0.29 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.36 | MC |
| SRR1213695 | root | wt | 1.66 | MC |
| SRR4947504 | root | control | 0.87 | MC |
| SRR2154083 | seedling | wt | 0.58 | MC |
| SRR2154084 | seedling | wt | 0.29 | MC |
| SRR3098742 | seedling | wt | 0.25 | MC |
| SRR3098743 | seedling | wt | 0.17 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.33 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.74 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.33 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.54 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.38 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.27 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.75 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.49 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.51 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.95 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.45 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.34 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.61 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.35 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.55 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.63 | MC |