| SRR4457249 | 2nd_leaf | DAH4 | 3.75 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.33 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 4.65 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.45 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.85 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 6.39 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.35 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.63 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.67 | MC |
| SRR4947495 | root | control | 2.92 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.59 | MC |
| SRR976168 | flag_leaf | wild_type | 2.81 | MC |
| SRR4457231 | flag_leaf | DAH4 | 3.37 | MC |
| SRR4457246 | flag_leaf | DAH44 | 4.27 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.78 | MC |
| SRR4457248 | flag_leaf | DAH44 | 5.04 | MC |
| SRR8060835 | leaf | wild_type | 0.96 | MC |
| SRR8060836 | leaf | wild_type | 1.60 | MC |
| SRR8060837 | leaf | wild_type | 1.23 | MC |
| SRR8240824 | leaf | wild_type | 1.16 | MC |
| SRR8240825 | leaf | wild_type | 0.71 | MC |
| SRR8240826 | leaf | wild_type | 0.86 | MC |
| SRR8240818 | leaf | wild_type | 0.41 | MC |
| SRR8240819 | leaf | wild_type | 0.43 | MC |
| SRR8240820 | leaf | wild_type | 0.62 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.42 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 2.70 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.37 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.48 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.76 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.54 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.00 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.70 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.61 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.79 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.35 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.23 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.82 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.44 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.77 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.98 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.98 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.18 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.88 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.46 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.14 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.43 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.13 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.53 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.36 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.34 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.66 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.52 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.46 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.05 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.70 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.02 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.75 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.08 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.23 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.09 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.70 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.71 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.20 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.06 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.01 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.24 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.93 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.62 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.01 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.24 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.93 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.62 | MC |
| SRR1761528 | leaf | drought | 4.01 | MC |
| SRR1761529 | leaf | drought | 4.24 | MC |
| SRR1761530 | leaf | control | 3.93 | MC |
| SRR1761531 | leaf | control | 3.62 | MC |
| SRR504365 | leaf | wt | 3.37 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.02 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.88 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.82 | MC |
| SRR6417967 | leaf | H2O_control | 0.90 | MC |
| SRR6417968 | leaf | H2O_control | 0.90 | MC |
| SRR6417969 | leaf | H2O_control | 0.71 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.05 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 3.26 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.03 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 3.79 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 4.00 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.20 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.97 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.53 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.35 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.70 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.26 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.98 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.93 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.61 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.54 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.32 | MC |
| SRR1213692 | leaf | wt | 2.85 | MC |
| SRR1213693 | leaf | wt | 1.62 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.82 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.30 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.79 | MC |
| SRR6502088 | leaf | control | 1.26 | MC |
| SRR6502089 | leaf | control | 0.86 | MC |
| SRR6502090 | leaf | control | 0.96 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.98 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.28 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.61 | MC |
| SRR6502100 | leaf | control | 0.89 | MC |
| SRR6502101 | leaf | control | 0.80 | MC |
| SRR6502102 | leaf | control | 0.90 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 1.48 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.98 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.10 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.92 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.32 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.86 | MC |
| SRR6168973 | leaf | none (control) | 0.92 | MC |
| SRR6168974 | leaf | none (control) | 1.26 | MC |
| SRR6168975 | leaf | none (control) | 0.69 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.37 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.92 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 2.54 | MC |
| SRR6168979 | leaf | none (control) | 0.69 | MC |
| SRR6168980 | leaf | none (control) | 1.05 | MC |
| SRR6168981 | leaf | none (control) | 1.27 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.09 | MC |
| SRR8582888 | panicle | AM | 0.29 | MC |
| SRR8582889 | panicle | AM | 0.18 | MC |
| SRR8582890 | panicle | AM | 0.72 | MC |
| SRR8582891 | panicle | PM | 0.51 | MC |
| SRR8582893 | panicle | PM | 0.26 | MC |
| SRR4947496 | root | control | 2.96 | MC |
| SRR1213695 | root | wt | 2.07 | MC |
| SRR4947478 | root | control | 1.93 | MC |
| SRR4947479 | root | control | 2.11 | MC |
| SRR4947480 | root | control | 2.72 | MC |
| SRR4947481 | root | control | 4.33 | MC |
| SRR4947482 | root | Al | 2.47 | MC |
| SRR4947483 | root | Al | 3.10 | MC |
| SRR4947484 | root | Al | 3.62 | MC |
| SRR4947485 | root | Al | 3.12 | MC |
| SRR4947487 | root | control | 1.79 | MC |
| SRR4947488 | root | control | 2.52 | MC |
| SRR4947489 | root | control | 2.71 | MC |
| SRR4947490 | root | Al | 3.31 | MC |
| SRR4947491 | root | Al | 3.28 | MC |
| SRR4947492 | root | Al | 4.56 | MC |
| SRR4947493 | root | Al | 3.39 | MC |
| SRR4947494 | root | control | 2.03 | MC |
| SRR4947497 | root | control | 2.43 | MC |
| SRR4947498 | root | Al | 3.75 | MC |
| SRR4947499 | root | Al | 3.14 | MC |
| SRR4947500 | root | Al | 2.96 | MC |
| SRR4947501 | root | Al | 4.44 | MC |
| SRR4947502 | root | control | 1.82 | MC |
| SRR4947503 | root | control | 1.77 | MC |
| SRR4947504 | root | control | 2.37 | MC |
| SRR4947505 | root | control | 2.35 | MC |
| SRR4947506 | root | Al | 2.63 | MC |
| SRR4947507 | root | Al | 3.13 | MC |
| SRR4947508 | root | Al | 2.86 | MC |
| SRR4947509 | root | Al | 3.74 | MC |
| SRR6502093 | root | 100 mM NaCl | 5.73 | MC |
| SRR6502094 | root | control | 4.40 | MC |
| SRR6502095 | root | control | 3.71 | MC |
| SRR6502096 | root | control | 3.10 | MC |
| SRR6502103 | root | 100 mM NaCl | 5.20 | MC |
| SRR6502105 | root | 100 mM NaCl | 4.48 | MC |
| SRR6502106 | root | control | 3.93 | MC |
| SRR6502107 | root | control | 3.03 | MC |
| SRR6502108 | root | control | 4.54 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.96 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.94 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.78 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.66 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.18 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.18 | MC |
| SRR6441554 | seedling | wild_type | 1.32 | MC |
| SRR6441555 | seedling | wild_type | 1.16 | MC |
| SRR2154086 | seedling | wt | 2.32 | MC |
| SRR2154084 | seedling | wt | 2.71 | MC |
| SRR2154085 | seedling | wt | 2.20 | MC |
| SRR2154087 | seedling | wt | 2.71 | MC |
| SRR3098741 | seedling | wt | 2.26 | MC |
| SRR3098742 | seedling | wt | 1.73 | MC |
| SRR3098743 | seedling | wt | 2.26 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.44 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.26 | MC |
| SRR1944583 | seedling | no_treatment | 2.46 | MC |
| SRR358791 | seedling | wt | 2.15 | MC |
| SRR358792 | seedling | wt | 1.67 | MC |
| SRR358793 | seedling | wt | 0.56 | MC |
| SRR358794 | seedling | wt | 0.72 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.13 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.31 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.82 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.91 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.30 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.30 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.08 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.30 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.23 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.72 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.31 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.24 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.79 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.07 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.37 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.07 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.14 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.95 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.79 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.49 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.94 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.46 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.85 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.88 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.45 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.07 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.50 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.15 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.47 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.44 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.62 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.51 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.77 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.61 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.16 | MC |