| SRR4457249 | 2nd_leaf | DAH4 | 2.30 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.98 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.04 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 3.32 | MC |
| SRR3745125 | anther | wt | 4.94 | MC |
| SRR3745126 | anther | wt | 4.31 | MC |
| SRR3745127 | anther | wt | 4.39 | MC |
| SRR358795 | callus | wt | 6.88 | MC |
| SRR358796 | callus | wt | 9.29 | MC |
| SRR358797 | callus | wt | 6.91 | MC |
| SRR358798 | callus | wt | 7.10 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.31 | MC |
| SRR2338866 | endosprem | control | 2.40 | MC |
| SRR2338869 | endosprem | high_temperature | 2.48 | MC |
| SRR976168 | flag_leaf | wild_type | 2.52 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.53 | MC |
| SRR8060835 | leaf | wild_type | 2.36 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.86 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.03 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.07 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.94 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.81 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.66 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.40 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.05 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.78 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.61 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.62 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.81 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.35 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.57 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 6.42 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.78 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.83 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.71 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.97 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.03 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.23 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.71 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.26 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.42 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.80 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.48 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.70 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.79 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.22 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 4.22 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 5.07 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.22 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 4.22 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 5.07 | MC |
| SRR1761528 | leaf | drought | 4.22 | MC |
| SRR1761530 | leaf | control | 4.22 | MC |
| SRR1761531 | leaf | control | 5.07 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.99 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.73 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.85 | MC |
| SRR6417967 | leaf | H2O_control | 3.43 | MC |
| SRR6417968 | leaf | H2O_control | 1.30 | MC |
| SRR6417969 | leaf | H2O_control | 3.22 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.16 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.39 | MC |
| SRR1213693 | leaf | wt | 2.80 | MC |
| SRR6502088 | leaf | control | 3.95 | MC |
| SRR6502089 | leaf | control | 3.99 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.02 | MC |
| SRR6502100 | leaf | control | 4.02 | MC |
| SRR6502101 | leaf | control | 3.05 | MC |
| SRR6502102 | leaf | control | 3.85 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 5.90 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 6.96 | MC |
| SRR6168975 | leaf | none (control) | 4.32 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 4.86 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.64 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.65 | MC |
| SRR6168980 | leaf | none (control) | 1.61 | MC |
| SRR6168981 | leaf | none (control) | 2.56 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.96 | MC |
| SRR8582888 | panicle | AM | 3.00 | MC |
| SRR8582891 | panicle | PM | 2.12 | MC |
| SRR8582892 | panicle | PM | 2.29 | MC |
| SRR8582893 | panicle | PM | 2.83 | MC |
| SRR4947496 | root | control | 2.64 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.88 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.76 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.23 | MC |
| SRR4947480 | root | control | 2.98 | MC |
| SRR4947481 | root | control | 3.85 | MC |
| SRR4947484 | root | Al | 3.56 | MC |
| SRR4947485 | root | Al | 1.96 | MC |
| SRR4947488 | root | control | 3.48 | MC |
| SRR4947489 | root | control | 1.92 | MC |
| SRR4947492 | root | Al | 3.07 | MC |
| SRR4947493 | root | Al | 2.24 | MC |
| SRR4947497 | root | control | 1.93 | MC |
| SRR4947500 | root | Al | 2.87 | MC |
| SRR4947501 | root | Al | 2.98 | MC |
| SRR4947504 | root | control | 4.85 | MC |
| SRR4947505 | root | control | 3.02 | MC |
| SRR4947508 | root | Al | 3.71 | MC |
| SRR4947509 | root | Al | 3.80 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.66 | MC |
| SRR1740428 | root_meristematic_zone | wt | 4.41 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.86 | MC |
| SRR2857719 | seedling | drought_stress_0h | 4.01 | MC |
| SRR358791 | seedling | wt | 6.87 | MC |
| SRR358792 | seedling | wt | 5.48 | MC |
| SRR358793 | seedling | wt | 2.31 | MC |
| SRR358794 | seedling | wt | 2.29 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.88 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.57 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.30 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.03 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.89 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.89 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.98 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.40 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.08 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.97 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.26 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.00 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.91 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.38 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.57 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.59 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.76 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.85 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.98 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.42 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.06 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 5.43 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 6.15 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 7.00 | MC |