| SRR3745125 | anther | wt | 2.23 | MC |
| SRR3745126 | anther | wt | 2.83 | MC |
| SRR3745127 | anther | wt | 3.69 | MC |
| SRR358795 | callus | wt | 7.80 | MC |
| SRR358796 | callus | wt | 8.34 | MC |
| SRR5560727 | caryopsis | wild_type | 3.83 | MC |
| SRR7265410 | coleoptile | 3dN | 3.65 | MC |
| SRR7265412 | coleoptile | 4dA | 1.10 | MC |
| SRR7265413 | coleoptile | 4dA | 5.04 | MC |
| SRR7265414 | coleoptile | 4dA | 2.75 | MC |
| SRR7265415 | coleoptile | 4dN | 3.66 | MC |
| SRR7265416 | coleoptile | 4dN | 3.01 | MC |
| SRR7265417 | coleoptile | 4dN | 3.33 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.90 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.01 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.08 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.48 | MC |
| SRR7265377 | embryo | 1hA | 2.99 | MC |
| SRR7265384 | embryo | 3hA | 4.15 | MC |
| SRR2338866 | endosprem | control | 2.56 | MC |
| SRR2338867 | endosprem | control | 1.28 | MC |
| SRR2338868 | endosprem | high_temperature | 0.64 | MC |
| SRR2338869 | endosprem | high_temperature | 1.88 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.19 | MC |
| SRR8060835 | leaf | wild_type | 0.64 | MC |
| SRR8060836 | leaf | wild_type | 1.19 | MC |
| SRR8060837 | leaf | wild_type | 0.57 | MC |
| SRR8240824 | leaf | wild_type | 1.66 | MC |
| SRR8240825 | leaf | wild_type | 0.44 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.29 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.02 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.87 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.48 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.24 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.56 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.85 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.78 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.69 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.56 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.39 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.46 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.78 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.81 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.57 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.51 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.21 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.40 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.83 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.34 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.57 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.61 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.72 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.39 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.48 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.70 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.70 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.71 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.82 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.71 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.82 | MC |
| SRR1761528 | leaf | drought | 0.71 | MC |
| SRR1761529 | leaf | drought | 0.82 | MC |
| SRR504365 | leaf | wt | 0.75 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.66 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.88 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.34 | MC |
| SRR6417967 | leaf | H2O_control | 1.16 | MC |
| SRR6417968 | leaf | H2O_control | 0.64 | MC |
| SRR6417969 | leaf | H2O_control | 0.47 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.40 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.60 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.70 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.41 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.65 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.27 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 2.13 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.86 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.67 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.88 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.50 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.70 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.73 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.86 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.16 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.63 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.46 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.55 | MC |
| SRR1213692 | leaf | wt | 0.41 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.19 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.50 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.81 | MC |
| SRR6502088 | leaf | control | 0.72 | MC |
| SRR6502089 | leaf | control | 2.52 | MC |
| SRR6502090 | leaf | control | 1.28 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.92 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.33 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.31 | MC |
| SRR6502100 | leaf | control | 1.27 | MC |
| SRR6502101 | leaf | control | 1.21 | MC |
| SRR6502102 | leaf | control | 0.90 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.17 | MC |
| SRR6168979 | leaf | none (control) | 0.71 | MC |
| SRR6168980 | leaf | none (control) | 0.54 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 2.63 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.91 | MC |
| SRR8582888 | panicle | AM | 2.21 | MC |
| SRR8582889 | panicle | AM | 1.54 | MC |
| SRR8582890 | panicle | AM | 2.18 | MC |
| SRR8582891 | panicle | PM | 1.26 | MC |
| SRR8582892 | panicle | PM | 0.68 | MC |
| SRR8582893 | panicle | PM | 1.03 | MC |
| SRR4947496 | root | control | 4.65 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.25 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.12 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.29 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.69 | MC |
| SRR5126147 | root | "mock,1_day" | 3.34 | MC |
| SRR5126149 | root | "mock,1_day" | 2.26 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.72 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.24 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.69 | MC |
| SRR5126153 | root | "mock,7_days" | 3.84 | MC |
| SRR5126155 | root | "mock,7_days" | 4.18 | MC |
| SRR5126157 | root | "mock,7_days" | 2.73 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.62 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.72 | MC |
| SRR5126165 | root | "mock,14_days" | 2.31 | MC |
| SRR5126167 | root | "mock,14_days" | 3.06 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 4.04 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.41 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.22 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.40 | MC |
| SRR1213694 | root | wt | 1.56 | MC |
| SRR4947480 | root | control | 3.61 | MC |
| SRR4947481 | root | control | 5.30 | MC |
| SRR4947492 | root | Al | 5.31 | MC |
| SRR6502094 | root | control | 3.90 | MC |
| SRR6502096 | root | control | 3.94 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.20 | MC |
| SRR6502104 | root | 100 mM NaCl | 4.10 | MC |
| SRR6502106 | root | control | 1.72 | MC |
| SRR6502107 | root | control | 2.16 | MC |
| SRR6502108 | root | control | 3.67 | MC |
| SRR1740434 | root_differentiation_zone | wt | 3.35 | MC |
| SRR6441555 | seedling | wild_type | 1.88 | MC |
| SRR3098741 | seedling | wt | 1.32 | MC |
| SRR3098742 | seedling | wt | 2.76 | MC |
| SRR3098743 | seedling | wt | 1.92 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.25 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.64 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.73 | MC |
| SRR1944583 | seedling | no_treatment | 1.76 | MC |
| SRR358793 | seedling | wt | 0.77 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.32 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.18 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.75 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.47 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.86 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.42 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.64 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.19 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.18 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.07 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.52 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.02 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.80 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.25 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.40 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.56 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.37 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.44 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.27 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.63 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.88 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.68 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.31 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.51 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 6.39 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 7.58 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 7.04 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 6.12 | MC |