| SRR4457249 | 2nd_leaf | DAH4 | 1.83 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.10 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.39 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.75 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.40 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 3.03 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.25 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.24 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.47 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 3.55 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.61 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.14 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.90 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 2.84 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.71 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.63 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.30 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.95 | MC |
| SRR3745125 | anther | wt | 3.11 | MC |
| SRR3745126 | anther | wt | 2.21 | MC |
| SRR3745127 | anther | wt | 2.63 | MC |
| SRR358797 | callus | wt | 7.43 | MC |
| SRR5560727 | caryopsis | wild_type | 0.61 | MC |
| SRR5560728 | caryopsis | wild_type | 1.63 | MC |
| SRR5560729 | caryopsis | wild_type | 3.76 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.40 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.95 | MC |
| SRR7265400 | coleoptile | 2dA | 0.41 | MC |
| SRR7265401 | coleoptile | 2dA | 0.33 | MC |
| SRR7265402 | coleoptile | 2dA | 0.49 | MC |
| SRR7265403 | coleoptile | 2dN | 1.12 | MC |
| SRR7265404 | coleoptile | 2dN | 3.21 | MC |
| SRR7265405 | coleoptile | 2dN | 1.90 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.53 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.93 | MC |
| SRR7265388 | embryo | 12hA | 3.06 | MC |
| SRR7265389 | embryo | 12hA | 2.84 | MC |
| SRR7265390 | embryo | 12hA | 3.09 | MC |
| SRR7265395 | embryo | 24hA | 1.73 | MC |
| SRR7265396 | embryo | 24hA | 1.33 | MC |
| SRR7265397 | embryo | 24hN | 2.87 | MC |
| SRR7265399 | embryo | 24hN | 4.08 | MC |
| SRR2338868 | endosprem | high_temperature | 1.91 | MC |
| SRR2338869 | endosprem | high_temperature | 0.62 | MC |
| SRR976168 | flag_leaf | wild_type | 2.99 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.67 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.69 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.09 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.92 | MC |
| SRR4457236 | flag_leaf | DAH12 | 3.19 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.26 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.03 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.62 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.91 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.89 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.58 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.74 | MC |
| SRR4457246 | flag_leaf | DAH44 | 3.44 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.43 | MC |
| SRR1213691 | flower | wt | 0.30 | MC |
| SRR8060835 | leaf | wild_type | 0.39 | MC |
| SRR8060836 | leaf | wild_type | 2.04 | MC |
| SRR8060837 | leaf | wild_type | 0.62 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.71 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.97 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.18 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.82 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.13 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.41 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.25 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.75 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.97 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.77 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.05 | MC |
| SRR1761530 | leaf | control | 1.77 | MC |
| SRR1761531 | leaf | control | 2.00 | MC |
| SRR504365 | leaf | wt | 3.38 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.29 | MC |
| SRR6502088 | leaf | control | 1.70 | MC |
| SRR6502089 | leaf | control | 2.67 | MC |
| SRR6502090 | leaf | control | 2.75 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.95 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.83 | MC |
| SRR6502100 | leaf | control | 1.29 | MC |
| SRR6502101 | leaf | control | 1.62 | MC |
| SRR6502102 | leaf | control | 1.12 | MC |
| SRR5856927 | leaf | control | 2.34 | MC |
| SRR5856928 | leaf | control | 2.07 | MC |
| SRR5856929 | leaf | control | 0.88 | MC |
| SRR5856933 | leaf | control | 1.18 | MC |
| SRR5856934 | leaf | control | 1.87 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 8.08 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 7.21 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 1.74 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.13 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 1.24 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.04 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.86 | MC |
| SRR8582888 | panicle | AM | 0.46 | MC |
| SRR8582890 | panicle | AM | 0.34 | MC |
| SRR8582891 | panicle | PM | 0.79 | MC |
| SRR8582892 | panicle | PM | 0.65 | MC |
| SRR8582893 | panicle | PM | 0.73 | MC |
| SRR5110429 | panicle | Dawn | 1.06 | MC |
| SRR5110431 | panicle | Dawn | 0.77 | MC |
| SRR5110432 | panicle | Dawn | 0.66 | MC |
| SRR4947496 | root | control | 1.00 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.66 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.08 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.56 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.78 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.89 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.09 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.25 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.38 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.29 | MC |
| SRR5110445 | panicle | Dusk | 1.17 | MC |
| SRR5110446 | panicle | Dusk | 1.31 | MC |
| SRR5110447 | panicle | Dusk | 0.57 | MC |
| SRR5110448 | panicle | Dusk | 1.58 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.06 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.11 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.78 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.76 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.09 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.60 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.67 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.62 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.46 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.62 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.22 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.02 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.35 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.67 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.77 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.09 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.96 | MC |
| SRR1213694 | root | wt | 1.61 | MC |
| SRR4947480 | root | control | 1.84 | MC |
| SRR4947481 | root | control | 1.94 | MC |
| SRR4947482 | root | Al | 0.64 | MC |
| SRR4947484 | root | Al | 1.90 | MC |
| SRR4947487 | root | control | 0.51 | MC |
| SRR4947488 | root | control | 0.87 | MC |
| SRR4947489 | root | control | 1.24 | MC |
| SRR4947492 | root | Al | 2.15 | MC |
| SRR4947493 | root | Al | 2.98 | MC |
| SRR4947497 | root | control | 0.90 | MC |
| SRR4947500 | root | Al | 1.03 | MC |
| SRR4947501 | root | Al | 0.51 | MC |
| SRR4947504 | root | control | 1.39 | MC |
| SRR4947505 | root | control | 1.28 | MC |
| SRR4947506 | root | Al | 0.65 | MC |
| SRR4947508 | root | Al | 2.06 | MC |
| SRR4947509 | root | Al | 3.51 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.53 | MC |
| SRR6502092 | root | 100 mM NaCl | 1.35 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.28 | MC |
| SRR6502096 | root | control | 0.48 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.02 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.12 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.75 | MC |
| SRR6502106 | root | control | 0.71 | MC |
| SRR6502107 | root | control | 0.26 | MC |
| SRR6502108 | root | control | 0.61 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.54 | MC |
| SRR6441554 | seedling | wild_type | 0.50 | MC |
| SRR6441555 | seedling | wild_type | 1.82 | MC |
| SRR2154083 | seedling | wt | 2.50 | MC |
| SRR3098742 | seedling | wt | 2.10 | MC |
| SRR1944583 | seedling | no_treatment | 2.05 | MC |
| SRR358791 | seedling | wt | 7.01 | MC |
| SRR358792 | seedling | wt | 6.23 | MC |
| SRR358793 | seedling | wt | 5.81 | MC |
| SRR358794 | seedling | wt | 5.68 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.15 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.36 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.15 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.47 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.51 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.47 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.62 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.35 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.00 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.78 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.34 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.98 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.00 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.78 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.90 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.91 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.67 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.77 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.95 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.43 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.76 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.60 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.39 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.38 | MC |