| SRR358796 | callus | wt | 1.48 | MC |
| SRR5560727 | caryopsis | wild_type | 0.33 | MC |
| SRR5560729 | caryopsis | wild_type | 0.78 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.18 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.75 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.60 | MC |
| SRR7265376 | embryo | 1hA | 2.22 | MC |
| SRR7265377 | embryo | 1hA | 1.98 | MC |
| SRR7265378 | embryo | 1hA | 2.59 | MC |
| SRR7265379 | embryo | 1hN | 1.21 | MC |
| SRR7265380 | embryo | 1hN | 1.61 | MC |
| SRR7265381 | embryo | 1hN | 1.18 | MC |
| SRR7265391 | embryo | 12hN | 1.29 | MC |
| SRR7265392 | embryo | 12hN | 1.06 | MC |
| SRR7265393 | embryo | 12hN | 1.24 | MC |
| SRR7265398 | embryo | 24hN | 0.93 | MC |
| SRR7265399 | embryo | 24hN | 0.46 | MC |
| SRR2338867 | endosprem | control | 0.49 | MC |
| SRR2338868 | endosprem | high_temperature | 0.49 | MC |
| SRR2338869 | endosprem | high_temperature | 1.22 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.94 | MC |
| SRR8240824 | leaf | wild_type | 0.76 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.35 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.99 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.95 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.95 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.17 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.37 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.88 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.67 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.84 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.85 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.48 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.43 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.30 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.62 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.47 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.75 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.41 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.16 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.15 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.32 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.48 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.38 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.18 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.95 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.53 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.94 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.56 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.94 | MC |
| SRR1761528 | leaf | drought | 2.56 | MC |
| SRR1761529 | leaf | drought | 1.94 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.87 | MC |
| SRR6417968 | leaf | H2O_control | 0.37 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.24 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.96 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 2.02 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 3.18 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 2.39 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.38 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.86 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.53 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.90 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.74 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.58 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.55 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.83 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.24 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 3.25 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.84 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.92 | MC |
| SRR6502089 | leaf | control | 0.34 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.21 | MC |
| SRR6168973 | leaf | none (control) | 2.36 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.84 | MC |
| SRR4947496 | root | control | 1.12 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.29 | MC |
| SRR5110437 | panicle | Dawn + 7h | 1.00 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.73 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.17 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.72 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.58 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.52 | MC |
| SRR5110446 | panicle | Dusk | 0.60 | MC |
| SRR5110447 | panicle | Dusk | 0.87 | MC |
| SRR5110448 | panicle | Dusk | 0.59 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.94 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.47 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.54 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.33 | MC |
| SRR5126147 | root | "mock,1_day" | 1.06 | MC |
| SRR5126148 | root | "mock,1_day" | 0.40 | MC |
| SRR5126149 | root | "mock,1_day" | 0.40 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.68 | MC |
| SRR5126155 | root | "mock,7_days" | 0.44 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.65 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.66 | MC |
| SRR5126165 | root | "mock,14_days" | 0.65 | MC |
| SRR5126167 | root | "mock,14_days" | 0.71 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.34 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.50 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.29 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.34 | MC |
| SRR1213695 | root | wt | 0.13 | MC |
| SRR4947478 | root | control | 2.31 | MC |
| SRR4947480 | root | control | 0.64 | MC |
| SRR4947482 | root | Al | 2.37 | MC |
| SRR4947483 | root | Al | 0.56 | MC |
| SRR4947485 | root | Al | 0.53 | MC |
| SRR4947487 | root | control | 1.13 | MC |
| SRR4947488 | root | control | 0.69 | MC |
| SRR4947489 | root | control | 0.57 | MC |
| SRR4947490 | root | Al | 1.83 | MC |
| SRR4947493 | root | Al | 0.58 | MC |
| SRR4947494 | root | control | 1.09 | MC |
| SRR4947500 | root | Al | 0.54 | MC |
| SRR4947502 | root | control | 0.49 | MC |
| SRR4947503 | root | control | 0.62 | MC |
| SRR4947504 | root | control | 0.47 | MC |
| SRR4947506 | root | Al | 1.95 | MC |
| SRR4947508 | root | Al | 0.80 | MC |
| SRR4947509 | root | Al | 1.04 | MC |
| SRR6502096 | root | control | 0.42 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.38 | MC |
| SRR6502106 | root | control | 0.38 | MC |
| SRR6502107 | root | control | 0.48 | MC |
| SRR2154083 | seedling | wt | 0.76 | MC |
| SRR2154085 | seedling | wt | 0.71 | MC |
| SRR2154087 | seedling | wt | 2.44 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.70 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.82 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.57 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.67 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.58 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.13 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.94 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.92 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.02 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.28 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.99 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.83 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.72 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.32 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.51 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.55 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.39 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.36 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.44 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.44 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.55 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.47 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.84 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.01 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.60 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.62 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.65 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.53 | MC |