| SRR4457249 | 2nd_leaf | DAH4 | 3.48 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.89 | MC |
| SRR3745126 | anther | wt | 2.85 | MC |
| SRR6320473 | carpel | wt | 3.21 | MC |
| SRR5560727 | caryopsis | wild_type | 4.11 | MC |
| SRR5560728 | caryopsis | wild_type | 2.76 | MC |
| SRR5560729 | caryopsis | wild_type | 2.19 | MC |
| SRR4947495 | root | control | 3.83 | MC |
| SRR7265415 | coleoptile | 4dN | 4.76 | MC |
| SRR7265417 | coleoptile | 4dN | 3.91 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.43 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.52 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.32 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.39 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.61 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.85 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.52 | MC |
| SRR7265376 | embryo | 1hA | 1.80 | MC |
| SRR7265377 | embryo | 1hA | 1.34 | MC |
| SRR7265378 | embryo | 1hA | 1.30 | MC |
| SRR7265379 | embryo | 1hN | 1.61 | MC |
| SRR7265380 | embryo | 1hN | 1.28 | MC |
| SRR7265381 | embryo | 1hN | 1.36 | MC |
| SRR7265383 | embryo | 3hA | 2.51 | MC |
| SRR7265384 | embryo | 3hA | 3.52 | MC |
| SRR7265385 | embryo | 3hN | 2.05 | MC |
| SRR7265386 | embryo | 3hN | 2.33 | MC |
| SRR7265387 | embryo | 3hN | 2.50 | MC |
| SRR7265391 | embryo | 12hN | 4.56 | MC |
| SRR7265392 | embryo | 12hN | 4.16 | MC |
| SRR7265399 | embryo | 24hN | 4.00 | MC |
| SRR2338867 | endosprem | control | 1.71 | MC |
| SRR2338869 | endosprem | high_temperature | 1.77 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.65 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.51 | MC |
| SRR4457233 | flag_leaf | DAH4 | 3.04 | MC |
| SRR8240826 | leaf | wild_type | 1.27 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.93 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.05 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.42 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.83 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.47 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.18 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.41 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.68 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.12 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.72 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.98 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.76 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.92 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.71 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.42 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.58 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.32 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.68 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.21 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.68 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.21 | MC |
| SRR1761530 | leaf | control | 1.68 | MC |
| SRR1761531 | leaf | control | 3.21 | MC |
| SRR6417967 | leaf | H2O_control | 3.30 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.36 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.34 | MC |
| SRR6502090 | leaf | control | 1.68 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.69 | MC |
| SRR6502100 | leaf | control | 2.29 | MC |
| SRR6502102 | leaf | control | 2.66 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 3.85 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 5.34 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 1.14 | MC |
| SRR6168975 | leaf | none (control) | 3.80 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.93 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.16 | MC |
| SRR6168979 | leaf | none (control) | 1.06 | MC |
| SRR6168980 | leaf | none (control) | 1.43 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.99 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.39 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.79 | MC |
| SRR8582889 | panicle | AM | 0.35 | MC |
| SRR8582890 | panicle | AM | 1.14 | MC |
| SRR8582891 | panicle | PM | 3.20 | MC |
| SRR8582892 | panicle | PM | 1.25 | MC |
| SRR8582893 | panicle | PM | 1.40 | MC |
| SRR5110429 | panicle | Dawn | 2.56 | MC |
| SRR5110431 | panicle | Dawn | 1.34 | MC |
| SRR5110432 | panicle | Dawn | 2.32 | MC |
| SRR4947496 | root | control | 3.37 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.55 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.45 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.16 | MC |
| SRR5110437 | panicle | Dawn + 7h | 1.50 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.77 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.00 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.49 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 0.88 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.18 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.02 | MC |
| SRR5110445 | panicle | Dusk | 1.24 | MC |
| SRR5110446 | panicle | Dusk | 3.94 | MC |
| SRR5110447 | panicle | Dusk | 1.90 | MC |
| SRR5110448 | panicle | Dusk | 1.70 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.21 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.60 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.36 | MC |
| SRR5110452 | panicle | Dawn + 14h | 3.07 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 2.00 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 3.80 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.03 | MC |
| SRR5110458 | panicle | Dawn + 21h | 3.52 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.91 | MC |
| SRR5110460 | panicle | Dawn + 21h | 4.74 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.50 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 3.48 | MC |
| SRR4947478 | root | control | 3.18 | MC |
| SRR4947479 | root | control | 2.88 | MC |
| SRR4947480 | root | control | 2.64 | MC |
| SRR4947481 | root | control | 3.31 | MC |
| SRR4947485 | root | Al | 3.75 | MC |
| SRR4947489 | root | control | 3.08 | MC |
| SRR4947490 | root | Al | 3.27 | MC |
| SRR4947491 | root | Al | 3.51 | MC |
| SRR4947492 | root | Al | 3.53 | MC |
| SRR4947493 | root | Al | 3.47 | MC |
| SRR4947494 | root | control | 4.07 | MC |
| SRR4947497 | root | control | 1.45 | MC |
| SRR4947498 | root | Al | 3.77 | MC |
| SRR4947499 | root | Al | 4.29 | MC |
| SRR4947500 | root | Al | 2.81 | MC |
| SRR4947501 | root | Al | 3.45 | MC |
| SRR4947502 | root | control | 4.30 | MC |
| SRR4947503 | root | control | 2.99 | MC |
| SRR4947504 | root | control | 2.72 | MC |
| SRR4947505 | root | control | 3.62 | MC |
| SRR4947508 | root | Al | 3.93 | MC |
| SRR4947509 | root | Al | 3.63 | MC |
| SRR3098742 | seedling | wt | 2.63 | MC |
| SRR1944583 | seedling | no_treatment | 4.32 | MC |
| SRR358791 | seedling | wt | 6.24 | MC |
| SRR358792 | seedling | wt | 2.51 | MC |
| SRR358793 | seedling | wt | 4.71 | MC |
| SRR358794 | seedling | wt | 2.04 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.28 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.42 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.19 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.36 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.17 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.87 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.01 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.03 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.97 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.57 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.63 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.93 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.74 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.11 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.51 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.12 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.91 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.32 | MC |