| SRR4457251 | 2nd_leaf | DAH4 | 0.36 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.07 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.57 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.92 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.86 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.41 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.58 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.30 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.46 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.37 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.99 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.88 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.39 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.56 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.52 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.56 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.81 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.15 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.90 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.59 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.44 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.20 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.12 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.22 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.43 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.42 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.63 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.34 | MC |
| SRR8060835 | leaf | wild_type | 0.21 | MC |
| SRR8060836 | leaf | wild_type | 0.49 | MC |
| SRR8060837 | leaf | wild_type | 0.20 | MC |
| SRR8240824 | leaf | wild_type | 0.24 | MC |
| SRR8240820 | leaf | wild_type | 0.21 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.99 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.74 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.91 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.61 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.44 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.55 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.91 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.61 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.44 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.55 | MC |
| SRR1761528 | leaf | drought | 0.91 | MC |
| SRR1761529 | leaf | drought | 0.61 | MC |
| SRR1761530 | leaf | control | 0.44 | MC |
| SRR1761531 | leaf | control | 1.55 | MC |
| SRR504365 | leaf | wt | 0.64 | MC |
| SRR6417969 | leaf | H2O_control | 0.78 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.89 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.41 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.48 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.21 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.61 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.47 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.86 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.35 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.09 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.50 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.75 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.70 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.43 | MC |
| SRR1213692 | leaf | wt | 2.48 | MC |
| SRR1213693 | leaf | wt | 1.71 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.61 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.83 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.53 | MC |
| SRR6502088 | leaf | control | 0.36 | MC |
| SRR6502089 | leaf | control | 0.59 | MC |
| SRR6502090 | leaf | control | 0.34 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.83 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.45 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.63 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.87 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.91 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.93 | MC |
| SRR1213694 | root | wt | 0.22 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.83 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.01 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.24 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.83 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.82 | MC |
| SRR2154086 | seedling | wt | 0.40 | MC |
| SRR2154085 | seedling | wt | 0.51 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.95 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.46 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.09 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.77 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.11 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.10 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.48 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.37 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.36 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.60 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.85 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.06 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.99 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.85 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.92 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.89 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.86 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.77 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.35 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.35 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.33 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.14 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.94 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.39 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.94 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.47 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.34 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.85 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.96 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.84 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.01 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.69 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 0.88 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.72 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.89 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.77 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.73 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.95 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.61 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.93 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.75 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.23 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.10 | MC |