| SRR5560727 | caryopsis | wild_type | 3.75 | MC |
| SRR5560728 | caryopsis | wild_type | 1.54 | MC |
| SRR5560729 | caryopsis | wild_type | 1.56 | MC |
| SRR4947495 | root | control | 2.33 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 2.53 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.10 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.89 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.76 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.36 | MC |
| SRR2338868 | endosprem | high_temperature | 1.45 | MC |
| SRR8060835 | leaf | wild_type | 0.45 | MC |
| SRR8060836 | leaf | wild_type | 1.48 | MC |
| SRR8240825 | leaf | wild_type | 0.67 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.30 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.20 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.23 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.56 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.51 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.52 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.46 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.79 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.43 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.61 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.40 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.16 | MC |
| SRR5856927 | leaf | control | 0.28 | MC |
| SRR5856930 | leaf | salt | 0.19 | MC |
| SRR5856934 | leaf | control | 0.25 | MC |
| SRR5856935 | leaf | control | 0.19 | MC |
| SRR5856937 | leaf | salt | 0.24 | MC |
| SRR5856938 | leaf | salt | 0.19 | MC |
| SRR6168973 | leaf | none (control) | 1.07 | MC |
| SRR6168975 | leaf | none (control) | 5.13 | MC |
| SRR6168979 | leaf | none (control) | 1.09 | MC |
| SRR6168981 | leaf | none (control) | 1.14 | MC |
| SRR8582891 | panicle | PM | 2.14 | MC |
| SRR8582893 | panicle | PM | 2.49 | MC |
| SRR4947496 | root | control | 0.64 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.75 | MC |
| SRR5110446 | panicle | Dusk | 0.36 | MC |
| SRR5110447 | panicle | Dusk | 0.40 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.30 | MC |
| SRR1633182 | panicle | WT | 2.53 | MC |
| SRR1633185 | panicle | WT | 1.70 | MC |
| SRR5126147 | root | "mock,1_day" | 0.45 | MC |
| SRR5126148 | root | "mock,1_day" | 0.28 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.54 | MC |
| SRR5126167 | root | "mock,14_days" | 0.52 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.54 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.50 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.28 | MC |
| SRR4947478 | root | control | 1.50 | MC |
| SRR4947480 | root | control | 1.34 | MC |
| SRR4947482 | root | Al | 0.49 | MC |
| SRR4947484 | root | Al | 0.66 | MC |
| SRR4947487 | root | control | 0.69 | MC |
| SRR4947488 | root | control | 0.49 | MC |
| SRR4947494 | root | control | 1.11 | MC |
| SRR4947502 | root | control | 1.43 | MC |
| SRR4947504 | root | control | 0.90 | MC |
| SRR4947505 | root | control | 0.81 | MC |
| SRR4947506 | root | Al | 0.73 | MC |
| SRR6502091 | root | 100 mM NaCl | 2.25 | MC |
| SRR6502094 | root | control | 1.11 | MC |
| SRR6502095 | root | control | 0.97 | MC |
| SRR6502096 | root | control | 0.70 | MC |
| SRR6502105 | root | 100 mM NaCl | 2.36 | MC |
| SRR6502107 | root | control | 1.40 | MC |
| SRR6441554 | seedling | wild_type | 0.51 | MC |
| SRR2154083 | seedling | wt | 1.49 | MC |
| SRR3098741 | seedling | wt | 0.40 | MC |
| SRR3098742 | seedling | wt | 0.23 | MC |
| SRR3098743 | seedling | wt | 1.19 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.08 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.12 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.47 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.91 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.37 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.39 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.47 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.40 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.66 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.72 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.65 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.41 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.21 | MC |