| SRR5560727 | caryopsis | wild_type | 0.38 | MC |
| SRR5560728 | caryopsis | wild_type | 0.31 | MC |
| SRR5560729 | caryopsis | wild_type | 0.64 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.97 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.53 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.11 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.36 | MC |
| SRR7265390 | embryo | 12hA | 0.43 | MC |
| SRR1213691 | flower | wt | 0.29 | MC |
| SRR5856932 | leaf | salt | 0.21 | MC |
| SRR5856935 | leaf | control | 0.44 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.70 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.46 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.44 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.59 | MC |
| SRR5126148 | root | "mock,1_day" | 0.30 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.33 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.34 | MC |
| SRR5126167 | root | "mock,14_days" | 0.34 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.37 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.53 | MC |
| SRR4947482 | root | Al | 0.43 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.40 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.28 | MC |
| SRR6502107 | root | control | 0.45 | MC |
| SRR2154086 | seedling | wt | 0.80 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.07 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.23 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.12 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.21 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.68 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.52 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.45 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.29 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.97 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.97 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.80 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.84 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.07 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.09 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.44 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.54 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.61 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.84 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.68 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 2.15 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.13 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.37 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.52 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.00 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 1.79 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.73 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.48 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.95 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.53 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.49 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.41 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.73 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.49 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.31 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.32 | MC |