| SRR4457249 | 2nd_leaf | DAH4 | 2.95 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.42 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.96 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.49 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.51 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.29 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.51 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.79 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.33 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.20 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.77 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 3.54 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 3.54 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.38 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.15 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.04 | MC |
| SRR3745125 | anther | wt | 5.74 | MC |
| SRR3745127 | anther | wt | 5.05 | MC |
| SRR358795 | callus | wt | 3.75 | MC |
| SRR358796 | callus | wt | 3.76 | MC |
| SRR358797 | callus | wt | 2.86 | MC |
| SRR358798 | callus | wt | 2.48 | MC |
| SRR7265400 | coleoptile | 2dA | 1.71 | MC |
| SRR7265401 | coleoptile | 2dA | 3.41 | MC |
| SRR7265402 | coleoptile | 2dA | 3.44 | MC |
| SRR7265403 | coleoptile | 2dN | 3.41 | MC |
| SRR7265404 | coleoptile | 2dN | 3.18 | MC |
| SRR7265405 | coleoptile | 2dN | 2.91 | MC |
| SRR7265408 | coleoptile | 3dA | 2.72 | MC |
| SRR7265409 | coleoptile | 3dN | 2.69 | MC |
| SRR7265410 | coleoptile | 3dN | 2.35 | MC |
| SRR7265411 | coleoptile | 3dN | 2.79 | MC |
| SRR7265412 | coleoptile | 4dA | 0.92 | MC |
| SRR7265413 | coleoptile | 4dA | 2.97 | MC |
| SRR7265414 | coleoptile | 4dA | 3.48 | MC |
| SRR7265415 | coleoptile | 4dN | 3.61 | MC |
| SRR7265416 | coleoptile | 4dN | 3.16 | MC |
| SRR7265417 | coleoptile | 4dN | 2.64 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.81 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.19 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.79 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.56 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.59 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.60 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.60 | MC |
| SRR7265376 | embryo | 1hA | 2.00 | MC |
| SRR7265377 | embryo | 1hA | 1.90 | MC |
| SRR7265378 | embryo | 1hA | 2.22 | MC |
| SRR7265379 | embryo | 1hN | 2.14 | MC |
| SRR7265380 | embryo | 1hN | 1.01 | MC |
| SRR7265381 | embryo | 1hN | 2.09 | MC |
| SRR7265382 | embryo | 3hA | 2.76 | MC |
| SRR7265383 | embryo | 3hA | 1.14 | MC |
| SRR7265384 | embryo | 3hA | 2.04 | MC |
| SRR7265385 | embryo | 3hN | 2.58 | MC |
| SRR7265386 | embryo | 3hN | 1.93 | MC |
| SRR7265387 | embryo | 3hN | 1.62 | MC |
| SRR7265388 | embryo | 12hA | 4.41 | MC |
| SRR7265389 | embryo | 12hA | 4.13 | MC |
| SRR7265390 | embryo | 12hA | 3.75 | MC |
| SRR7265391 | embryo | 12hN | 3.09 | MC |
| SRR7265392 | embryo | 12hN | 2.57 | MC |
| SRR7265393 | embryo | 12hN | 3.45 | MC |
| SRR7265394 | embryo | 24hA | 3.94 | MC |
| SRR7265395 | embryo | 24hA | 3.74 | MC |
| SRR7265396 | embryo | 24hA | 3.27 | MC |
| SRR7265397 | embryo | 24hN | 3.76 | MC |
| SRR7265398 | embryo | 24hN | 4.27 | MC |
| SRR7265399 | embryo | 24hN | 4.25 | MC |
| SRR2338866 | endosprem | control | 3.77 | MC |
| SRR2338867 | endosprem | control | 2.20 | MC |
| SRR2338869 | endosprem | high_temperature | 2.60 | MC |
| SRR976168 | flag_leaf | wild_type | 1.58 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.51 | MC |
| SRR4457232 | flag_leaf | DAH4 | 3.08 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.02 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.60 | MC |
| SRR4457238 | flag_leaf | DAH20 | 2.44 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.91 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.37 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.21 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.74 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.73 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.90 | MC |
| SRR4457245 | flag_leaf | DAH36 | 3.51 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.58 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.19 | MC |
| SRR4457248 | flag_leaf | DAH44 | 0.86 | MC |
| SRR8240826 | leaf | wild_type | 2.08 | MC |
| SRR8240819 | leaf | wild_type | 2.09 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.76 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.94 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.20 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.75 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.49 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.00 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.11 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.02 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.24 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 3.76 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.46 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.96 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.72 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.48 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.31 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.98 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.21 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.57 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.47 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 4.48 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.75 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.27 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 5.36 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.75 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.27 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 5.36 | MC |
| SRR1761528 | leaf | drought | 2.75 | MC |
| SRR1761529 | leaf | drought | 2.27 | MC |
| SRR1761531 | leaf | control | 5.36 | MC |
| SRR504365 | leaf | wt | 3.67 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.94 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.95 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.93 | MC |
| SRR6417968 | leaf | H2O_control | 2.74 | MC |
| SRR6417969 | leaf | H2O_control | 3.51 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.93 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 2.67 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.62 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.74 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 2.02 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.69 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 2.45 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.21 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 3.52 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.37 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 3.36 | MC |
| SRR1213692 | leaf | wt | 4.47 | MC |
| SRR1213693 | leaf | wt | 3.37 | MC |
| SRR6168973 | leaf | none (control) | 3.89 | MC |
| SRR6168974 | leaf | none (control) | 3.79 | MC |
| SRR6168975 | leaf | none (control) | 2.85 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 6.64 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.97 | MC |
| SRR6168981 | leaf | none (control) | 0.53 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.20 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.27 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.23 | MC |
| SRR8582888 | panicle | AM | 3.11 | MC |
| SRR8582892 | panicle | PM | 6.31 | MC |
| SRR5110430 | panicle | Dawn | 0.62 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.34 | MC |
| SRR5110447 | panicle | Dusk | 0.45 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.35 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.50 | MC |
| SRR1633182 | panicle | WT | 2.19 | MC |
| SRR1633185 | panicle | WT | 3.18 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.35 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.28 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.25 | MC |
| SRR1213695 | root | wt | 3.11 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.58 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.92 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.81 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.86 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.12 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.67 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.70 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.53 | MC |
| SRR1944583 | seedling | no_treatment | 4.12 | MC |
| SRR358791 | seedling | wt | 1.42 | MC |
| SRR358792 | seedling | wt | 2.46 | MC |
| SRR358793 | seedling | wt | 1.23 | MC |
| SRR358794 | seedling | wt | 1.11 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.93 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.12 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.83 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.60 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.94 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.27 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.77 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.72 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.44 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.89 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.52 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.08 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.91 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.85 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.74 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.05 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.10 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.56 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.73 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.11 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.97 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.46 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.88 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.22 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.44 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.13 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.95 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.04 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 7.21 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 6.83 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 9.63 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 7.37 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.85 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.20 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.50 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.50 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.28 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.65 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.09 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.11 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.56 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.16 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.54 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 4.69 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.82 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.45 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.47 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.49 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.59 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.07 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.04 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.93 | MC |