| SRR4457256 | 2nd_leaf | DAH20 | 0.49 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.66 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.38 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.77 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.74 | MC |
| SRR5560728 | caryopsis | wild_type | 0.29 | MC |
| SRR7265404 | coleoptile | 2dN | 0.32 | MC |
| SRR7265405 | coleoptile | 2dN | 0.37 | MC |
| SRR7265390 | embryo | 12hA | 0.43 | MC |
| SRR7265396 | embryo | 24hA | 0.51 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.25 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.72 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.43 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.35 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.41 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.97 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.35 | MC |
| SRR8060836 | leaf | wild_type | 2.80 | MC |
| SRR8240826 | leaf | wild_type | 0.24 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.43 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.98 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.42 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.29 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.62 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.59 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.31 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.63 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.63 | MC |
| SRR1761528 | leaf | drought | 0.63 | MC |
| SRR504365 | leaf | wt | 2.00 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.11 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.93 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.55 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.49 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.37 | MC |
| SRR5856933 | leaf | control | 0.21 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.19 | MC |
| SRR6168973 | leaf | none (control) | 0.32 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.62 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.39 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.71 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.74 | MC |
| SRR5126155 | root | "mock,7_days" | 0.30 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.83 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.06 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.35 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.35 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.49 | MC |
| SRR4947498 | root | Al | 0.54 | MC |
| SRR6502108 | root | control | 0.82 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.26 | MC |
| SRR6441554 | seedling | wild_type | 0.34 | MC |
| SRR6441555 | seedling | wild_type | 0.23 | MC |
| SRR2154082 | seedling | wt | 0.84 | MC |
| SRR2154084 | seedling | wt | 1.01 | MC |
| SRR358791 | seedling | wt | 3.31 | MC |
| SRR358792 | seedling | wt | 1.74 | MC |
| SRR358793 | seedling | wt | 0.69 | MC |
| SRR358794 | seedling | wt | 3.11 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.58 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.93 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.29 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.39 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.43 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.02 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.75 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.27 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.98 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.90 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.04 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.76 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.34 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.69 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.40 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.67 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.57 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 0.77 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.15 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.52 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.49 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.45 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.55 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.85 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.57 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.16 | MC |