| SRR4457265 | 2nd_leaf | DAH44 | 3.92 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 6.00 | MC |
| SRR358795 | callus | wt | 3.60 | MC |
| SRR358796 | callus | wt | 7.03 | MC |
| SRR358797 | callus | wt | 3.04 | MC |
| SRR358798 | callus | wt | 7.31 | MC |
| SRR6320498 | carpel | wt | 1.89 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.03 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.05 | MC |
| SRR4947495 | root | control | 3.87 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.83 | MC |
| SRR7265400 | coleoptile | 2dA | 0.44 | MC |
| SRR7265401 | coleoptile | 2dA | 0.29 | MC |
| SRR7265402 | coleoptile | 2dA | 1.42 | MC |
| SRR7265403 | coleoptile | 2dN | 1.30 | MC |
| SRR7265405 | coleoptile | 2dN | 0.29 | MC |
| SRR7265406 | coleoptile | 3dA | 0.50 | MC |
| SRR7265407 | coleoptile | 3dA | 0.55 | MC |
| SRR7265411 | coleoptile | 3dN | 1.26 | MC |
| SRR7265412 | coleoptile | 4dA | 1.03 | MC |
| SRR7265413 | coleoptile | 4dA | 2.73 | MC |
| SRR7265414 | coleoptile | 4dA | 2.28 | MC |
| SRR7265417 | coleoptile | 4dN | 0.49 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.32 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.68 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.63 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.09 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.73 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.20 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.61 | MC |
| SRR7265376 | embryo | 1hA | 0.93 | MC |
| SRR7265377 | embryo | 1hA | 0.99 | MC |
| SRR7265378 | embryo | 1hA | 0.84 | MC |
| SRR7265379 | embryo | 1hN | 1.16 | MC |
| SRR7265380 | embryo | 1hN | 0.35 | MC |
| SRR7265381 | embryo | 1hN | 0.25 | MC |
| SRR7265382 | embryo | 3hA | 1.20 | MC |
| SRR7265383 | embryo | 3hA | 0.84 | MC |
| SRR7265384 | embryo | 3hA | 0.86 | MC |
| SRR7265385 | embryo | 3hN | 1.13 | MC |
| SRR7265386 | embryo | 3hN | 0.91 | MC |
| SRR7265387 | embryo | 3hN | 0.72 | MC |
| SRR7265389 | embryo | 12hA | 0.57 | MC |
| SRR7265395 | embryo | 24hA | 0.54 | MC |
| SRR7265397 | embryo | 24hN | 1.76 | MC |
| SRR7265399 | embryo | 24hN | 0.47 | MC |
| SRR2338867 | endosprem | control | 2.03 | MC |
| SRR976168 | flag_leaf | wild_type | 0.95 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.89 | MC |
| SRR4457248 | flag_leaf | DAH44 | 4.88 | MC |
| SRR8060835 | leaf | wild_type | 2.07 | MC |
| SRR8240824 | leaf | wild_type | 1.70 | MC |
| SRR8240825 | leaf | wild_type | 0.76 | MC |
| SRR8240826 | leaf | wild_type | 1.30 | MC |
| SRR8240819 | leaf | wild_type | 1.27 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.40 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 4.31 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.28 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.70 | MC |
| SRR8611900 | leaf | Non-inoculated | 3.10 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.93 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.50 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.10 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.83 | MC |
| SRR5856927 | leaf | control | 1.17 | MC |
| SRR5856928 | leaf | control | 1.03 | MC |
| SRR5856930 | leaf | salt | 0.73 | MC |
| SRR5856931 | leaf | salt | 1.12 | MC |
| SRR5856932 | leaf | salt | 0.85 | MC |
| SRR5856933 | leaf | control | 1.54 | MC |
| SRR5856934 | leaf | control | 2.01 | MC |
| SRR5856935 | leaf | control | 1.88 | MC |
| SRR5856937 | leaf | salt | 1.08 | MC |
| SRR5856938 | leaf | salt | 1.79 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.50 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 3.43 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 5.40 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.70 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 3.05 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.16 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.95 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 6.32 | MC |
| SRR6168973 | leaf | none (control) | 3.98 | MC |
| SRR6168974 | leaf | none (control) | 2.75 | MC |
| SRR6168975 | leaf | none (control) | 2.40 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.49 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.71 | MC |
| SRR6168979 | leaf | none (control) | 0.86 | MC |
| SRR6168980 | leaf | none (control) | 0.75 | MC |
| SRR6168981 | leaf | none (control) | 1.52 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.43 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.24 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.43 | MC |
| SRR8582891 | panicle | PM | 5.26 | MC |
| SRR8582892 | panicle | PM | 6.70 | MC |
| SRR4947496 | root | control | 2.82 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 4.50 | MC |
| SRR5110447 | panicle | Dusk | 2.80 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.72 | MC |
| SRR1633182 | panicle | WT | 2.69 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.55 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 3.18 | MC |
| SRR5126153 | root | "mock,7_days" | 3.93 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 5.03 | MC |
| SRR5126165 | root | "mock,14_days" | 4.62 | MC |
| SRR5126167 | root | "mock,14_days" | 3.88 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.94 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 4.45 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.47 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.03 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.46 | MC |
| SRR4947478 | root | control | 3.36 | MC |
| SRR4947479 | root | control | 1.98 | MC |
| SRR4947480 | root | control | 1.49 | MC |
| SRR4947481 | root | control | 2.26 | MC |
| SRR4947482 | root | Al | 2.80 | MC |
| SRR4947483 | root | Al | 1.97 | MC |
| SRR4947484 | root | Al | 1.12 | MC |
| SRR4947485 | root | Al | 1.85 | MC |
| SRR4947487 | root | control | 2.25 | MC |
| SRR4947488 | root | control | 2.78 | MC |
| SRR4947489 | root | control | 2.01 | MC |
| SRR4947490 | root | Al | 3.20 | MC |
| SRR4947491 | root | Al | 2.94 | MC |
| SRR4947492 | root | Al | 2.76 | MC |
| SRR4947493 | root | Al | 1.95 | MC |
| SRR4947494 | root | control | 1.39 | MC |
| SRR4947497 | root | control | 1.91 | MC |
| SRR4947498 | root | Al | 2.43 | MC |
| SRR4947499 | root | Al | 3.57 | MC |
| SRR4947500 | root | Al | 2.26 | MC |
| SRR4947501 | root | Al | 2.95 | MC |
| SRR4947502 | root | control | 2.95 | MC |
| SRR4947503 | root | control | 2.73 | MC |
| SRR4947504 | root | control | 1.08 | MC |
| SRR4947505 | root | control | 1.55 | MC |
| SRR4947506 | root | Al | 1.75 | MC |
| SRR4947507 | root | Al | 4.05 | MC |
| SRR4947508 | root | Al | 1.57 | MC |
| SRR4947509 | root | Al | 1.71 | MC |
| SRR6502093 | root | 100 mM NaCl | 5.75 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.52 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.63 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.82 | MC |
| SRR1740428 | root_meristematic_zone | wt | 3.00 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.48 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.98 | MC |
| SRR2154082 | seedling | wt | 1.59 | MC |
| SRR2154084 | seedling | wt | 1.77 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.84 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.24 | MC |
| SRR358791 | seedling | wt | 2.39 | MC |
| SRR358792 | seedling | wt | 2.69 | MC |
| SRR358793 | seedling | wt | 2.04 | MC |
| SRR358794 | seedling | wt | 1.13 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.36 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.64 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.97 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.45 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.27 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.26 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.84 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.87 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.08 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.18 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.97 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.55 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.58 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.53 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.98 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.37 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.57 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 4.87 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.90 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.53 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.15 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 7.57 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 2.37 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 3.41 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 7.71 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 5.35 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 5.64 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 6.17 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 4.66 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 6.23 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 6.76 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 5.11 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 7.21 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 4.64 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 5.42 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 4.52 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 5.54 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 5.81 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 6.98 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 5.32 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 5.07 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 5.45 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 6.08 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.69 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.58 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.39 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 2.45 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.03 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.17 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.37 | MC |