| SRR3745126 | anther | wt | 1.35 | MC |
| SRR3745127 | anther | wt | 0.95 | MC |
| SRR5560728 | caryopsis | wild_type | 0.44 | MC |
| SRR5560729 | caryopsis | wild_type | 1.74 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.54 | MC |
| SRR1213691 | flower | wt | 1.20 | MC |
| SRR8060835 | leaf | wild_type | 0.51 | MC |
| SRR8060836 | leaf | wild_type | 0.50 | MC |
| SRR8060837 | leaf | wild_type | 0.29 | MC |
| SRR8240824 | leaf | wild_type | 0.57 | MC |
| SRR8240826 | leaf | wild_type | 0.24 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.57 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.27 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.92 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.12 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.50 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.50 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.44 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.24 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.45 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.55 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.32 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.55 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.52 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.52 | MC |
| SRR1761530 | leaf | control | 0.51 | MC |
| SRR504365 | leaf | wt | 0.32 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.75 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.24 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.36 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.35 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.22 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.24 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.48 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.68 | MC |
| SRR1213692 | leaf | wt | 1.39 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.65 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.51 | MC |
| SRR6502088 | leaf | control | 0.30 | MC |
| SRR6168973 | leaf | none (control) | 1.19 | MC |
| SRR6168974 | leaf | none (control) | 1.31 | MC |
| SRR6168975 | leaf | none (control) | 1.45 | MC |
| SRR8582888 | panicle | AM | 0.42 | MC |
| SRR8582889 | panicle | AM | 0.12 | MC |
| SRR8582890 | panicle | AM | 0.41 | MC |
| SRR8582891 | panicle | PM | 1.96 | MC |
| SRR8582892 | panicle | PM | 2.73 | MC |
| SRR8582893 | panicle | PM | 1.22 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.16 | MC |
| SRR1633182 | panicle | WT | 0.45 | MC |
| SRR1633185 | panicle | WT | 0.61 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.52 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.79 | MC |
| SRR6441554 | seedling | wild_type | 1.23 | MC |
| SRR6441555 | seedling | wild_type | 0.77 | MC |
| SRR2154086 | seedling | wt | 0.83 | MC |
| SRR2154082 | seedling | wt | 0.55 | MC |
| SRR2154083 | seedling | wt | 1.62 | MC |
| SRR2154084 | seedling | wt | 1.73 | MC |
| SRR2154087 | seedling | wt | 0.51 | MC |
| SRR3098741 | seedling | wt | 1.67 | MC |
| SRR3098742 | seedling | wt | 2.61 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.59 | MC |
| SRR1944583 | seedling | no_treatment | 0.52 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.57 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.67 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.98 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.05 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.86 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.62 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.90 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.96 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.74 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.59 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.56 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.90 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.03 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.46 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.96 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.59 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.00 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.86 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.82 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.07 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.07 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.82 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.57 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.52 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.81 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.58 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.50 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.57 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.65 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.69 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.61 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.29 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.44 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.52 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.43 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.70 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.40 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.39 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.49 | MC |