| SRR5560727 | caryopsis | wild_type | 2.22 | MC |
| SRR5560728 | caryopsis | wild_type | 1.76 | MC |
| SRR5560729 | caryopsis | wild_type | 1.42 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.86 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.14 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.70 | MC |
| SRR7265402 | coleoptile | 2dA | 0.74 | MC |
| SRR7265403 | coleoptile | 2dN | 0.62 | MC |
| SRR7265404 | coleoptile | 2dN | 0.55 | MC |
| SRR7265405 | coleoptile | 2dN | 0.46 | MC |
| SRR7265407 | coleoptile | 3dA | 0.30 | MC |
| SRR7265409 | coleoptile | 3dN | 1.08 | MC |
| SRR7265410 | coleoptile | 3dN | 1.28 | MC |
| SRR7265411 | coleoptile | 3dN | 1.06 | MC |
| SRR7265415 | coleoptile | 4dN | 1.85 | MC |
| SRR7265416 | coleoptile | 4dN | 0.97 | MC |
| SRR7265417 | coleoptile | 4dN | 0.54 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.75 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.60 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.72 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.45 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.40 | MC |
| SRR7265377 | embryo | 1hA | 1.32 | MC |
| SRR7265378 | embryo | 1hA | 1.22 | MC |
| SRR7265379 | embryo | 1hN | 0.90 | MC |
| SRR7265380 | embryo | 1hN | 0.59 | MC |
| SRR7265381 | embryo | 1hN | 1.03 | MC |
| SRR7265382 | embryo | 3hA | 1.12 | MC |
| SRR7265383 | embryo | 3hA | 0.88 | MC |
| SRR7265384 | embryo | 3hA | 1.00 | MC |
| SRR7265385 | embryo | 3hN | 0.77 | MC |
| SRR7265386 | embryo | 3hN | 1.20 | MC |
| SRR7265387 | embryo | 3hN | 1.22 | MC |
| SRR7265388 | embryo | 12hA | 1.47 | MC |
| SRR7265390 | embryo | 12hA | 0.91 | MC |
| SRR7265391 | embryo | 12hN | 0.78 | MC |
| SRR7265392 | embryo | 12hN | 0.48 | MC |
| SRR7265393 | embryo | 12hN | 0.75 | MC |
| SRR7265394 | embryo | 24hA | 0.77 | MC |
| SRR7265395 | embryo | 24hA | 0.54 | MC |
| SRR7265396 | embryo | 24hA | 1.15 | MC |
| SRR7265397 | embryo | 24hN | 0.63 | MC |
| SRR7265398 | embryo | 24hN | 0.91 | MC |
| SRR7265399 | embryo | 24hN | 1.49 | MC |
| SRR2338869 | endosprem | high_temperature | 1.62 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.34 | MC |
| SRR1213691 | flower | wt | 1.05 | MC |
| SRR8060835 | leaf | wild_type | 0.22 | MC |
| SRR8060836 | leaf | wild_type | 0.48 | MC |
| SRR8240825 | leaf | wild_type | 0.38 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.82 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.59 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.54 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.44 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.58 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.76 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.47 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.26 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.18 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.54 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.38 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.40 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.47 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.45 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.48 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.61 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.48 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.44 | MC |
| SRR6502089 | leaf | control | 0.51 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.68 | MC |
| SRR5856931 | leaf | salt | 0.33 | MC |
| SRR5856932 | leaf | salt | 0.24 | MC |
| SRR5856934 | leaf | control | 0.64 | MC |
| SRR5856935 | leaf | control | 0.19 | MC |
| SRR5856937 | leaf | salt | 0.25 | MC |
| SRR5856938 | leaf | salt | 0.31 | MC |
| SRR6168973 | leaf | none (control) | 0.76 | MC |
| SRR6168974 | leaf | none (control) | 0.43 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.28 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.68 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.65 | MC |
| SRR5110430 | panicle | Dawn | 2.56 | MC |
| SRR5110431 | panicle | Dawn | 1.81 | MC |
| SRR5110432 | panicle | Dawn | 0.73 | MC |
| SRR4947496 | root | control | 0.49 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.65 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.27 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.70 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.45 | MC |
| SRR5110439 | panicle | Dawn + 7h | 3.05 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.41 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.01 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.72 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.94 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.98 | MC |
| SRR5110445 | panicle | Dusk | 4.09 | MC |
| SRR5110446 | panicle | Dusk | 0.76 | MC |
| SRR5110447 | panicle | Dusk | 1.80 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.44 | MC |
| SRR5110451 | panicle | Dawn + 14h | 3.62 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.36 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.22 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.43 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.54 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.87 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.34 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.27 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.46 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.40 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.86 | MC |
| SRR5126147 | root | "mock,1_day" | 1.12 | MC |
| SRR5126149 | root | "mock,1_day" | 0.82 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.76 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.15 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.55 | MC |
| SRR5126155 | root | "mock,7_days" | 1.16 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.95 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.00 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 3.16 | MC |
| SRR5126165 | root | "mock,14_days" | 0.93 | MC |
| SRR5126167 | root | "mock,14_days" | 1.05 | MC |
| SRR5126169 | root | "mock,14_days" | 1.35 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.29 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.86 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.17 | MC |
| SRR4947481 | root | control | 0.60 | MC |
| SRR4947485 | root | Al | 0.61 | MC |
| SRR4947499 | root | Al | 0.61 | MC |
| SRR4947507 | root | Al | 0.82 | MC |
| SRR4947508 | root | Al | 0.96 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.57 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.47 | MC |
| SRR2154086 | seedling | wt | 0.51 | MC |
| SRR2154087 | seedling | wt | 0.43 | MC |
| SRR3098741 | seedling | wt | 0.41 | MC |
| SRR3098742 | seedling | wt | 0.32 | MC |
| SRR3098743 | seedling | wt | 0.34 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.42 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.86 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.33 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.54 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.60 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.72 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.37 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.71 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.39 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.45 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.37 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.64 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.30 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.32 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.75 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.64 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.00 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.47 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.69 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.91 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.84 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.75 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.90 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.24 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.71 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.57 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.72 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.74 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.06 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.22 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.28 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.65 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.59 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.32 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.24 | MC |