| SRR3745125 | anther | wt | 1.79 | MC |
| SRR3745126 | anther | wt | 1.98 | MC |
| SRR3745127 | anther | wt | 1.86 | MC |
| SRR358795 | callus | wt | 1.15 | MC |
| SRR358796 | callus | wt | 2.05 | MC |
| SRR358797 | callus | wt | 1.88 | MC |
| SRR358798 | callus | wt | 1.75 | MC |
| SRR6320473 | carpel | wt | 1.46 | MC |
| SRR6320498 | carpel | wt | 2.11 | MC |
| SRR7265400 | coleoptile | 2dA | 3.74 | MC |
| SRR7265401 | coleoptile | 2dA | 3.57 | MC |
| SRR7265402 | coleoptile | 2dA | 3.44 | MC |
| SRR7265403 | coleoptile | 2dN | 2.65 | MC |
| SRR7265404 | coleoptile | 2dN | 1.99 | MC |
| SRR7265405 | coleoptile | 2dN | 2.28 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.86 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.63 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.75 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.48 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.71 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.49 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.68 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.54 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.31 | MC |
| SRR7265377 | embryo | 1hA | 0.56 | MC |
| SRR7265379 | embryo | 1hN | 0.30 | MC |
| SRR7265382 | embryo | 3hA | 1.88 | MC |
| SRR7265383 | embryo | 3hA | 1.09 | MC |
| SRR7265384 | embryo | 3hA | 1.56 | MC |
| SRR7265386 | embryo | 3hN | 0.31 | MC |
| SRR7265387 | embryo | 3hN | 0.57 | MC |
| SRR7265388 | embryo | 12hA | 1.67 | MC |
| SRR7265389 | embryo | 12hA | 1.49 | MC |
| SRR7265390 | embryo | 12hA | 1.70 | MC |
| SRR7265391 | embryo | 12hN | 1.22 | MC |
| SRR7265392 | embryo | 12hN | 1.27 | MC |
| SRR7265393 | embryo | 12hN | 0.81 | MC |
| SRR7265394 | embryo | 24hA | 1.61 | MC |
| SRR7265395 | embryo | 24hA | 2.32 | MC |
| SRR7265396 | embryo | 24hA | 2.43 | MC |
| SRR7265397 | embryo | 24hN | 1.03 | MC |
| SRR7265398 | embryo | 24hN | 1.35 | MC |
| SRR7265399 | embryo | 24hN | 1.14 | MC |
| SRR2338866 | endosprem | control | 1.71 | MC |
| SRR2338867 | endosprem | control | 1.60 | MC |
| SRR2338868 | endosprem | high_temperature | 2.49 | MC |
| SRR2338869 | endosprem | high_temperature | 2.59 | MC |
| SRR976168 | flag_leaf | wild_type | 2.56 | MC |
| SRR4457247 | flag_leaf | DAH44 | 5.22 | MC |
| SRR8060835 | leaf | wild_type | 1.15 | MC |
| SRR8060836 | leaf | wild_type | 1.81 | MC |
| SRR8060837 | leaf | wild_type | 0.84 | MC |
| SRR8240824 | leaf | wild_type | 2.16 | MC |
| SRR8240818 | leaf | wild_type | 2.09 | MC |
| SRR8240820 | leaf | wild_type | 2.34 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.65 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.41 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.26 | MC |
| SRR5856927 | leaf | control | 0.81 | MC |
| SRR5856928 | leaf | control | 0.74 | MC |
| SRR5856929 | leaf | control | 1.26 | MC |
| SRR5856932 | leaf | salt | 0.26 | MC |
| SRR5856933 | leaf | control | 1.12 | MC |
| SRR5856934 | leaf | control | 0.88 | MC |
| SRR5856935 | leaf | control | 0.94 | MC |
| SRR5856936 | leaf | salt | 0.22 | MC |
| SRR5856937 | leaf | salt | 0.25 | MC |
| SRR5856938 | leaf | salt | 0.19 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.47 | MC |
| SRR6168973 | leaf | none (control) | 0.26 | MC |
| SRR6168975 | leaf | none (control) | 0.66 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.43 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.44 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.79 | MC |
| SRR6168979 | leaf | none (control) | 0.35 | MC |
| SRR8582891 | panicle | PM | 5.23 | MC |
| SRR8582893 | panicle | PM | 3.69 | MC |
| SRR5110429 | panicle | Dawn | 3.40 | MC |
| SRR5110432 | panicle | Dawn | 0.51 | MC |
| SRR4947496 | root | control | 2.94 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.91 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.78 | MC |
| SRR5110446 | panicle | Dusk | 3.26 | MC |
| SRR5110447 | panicle | Dusk | 3.16 | MC |
| SRR5110448 | panicle | Dusk | 2.60 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.91 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.29 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.15 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.47 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.89 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.79 | MC |
| SRR5110459 | panicle | Dawn + 21h | 1.09 | MC |
| SRR1633182 | panicle | WT | 2.55 | MC |
| SRR1633185 | panicle | WT | 3.53 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.41 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.23 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.55 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.67 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.72 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.34 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.47 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.96 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.78 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.12 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.38 | MC |
| SRR4947480 | root | control | 2.12 | MC |
| SRR4947481 | root | control | 3.47 | MC |
| SRR4947484 | root | Al | 2.58 | MC |
| SRR4947485 | root | Al | 3.48 | MC |
| SRR4947488 | root | control | 2.55 | MC |
| SRR4947489 | root | control | 3.85 | MC |
| SRR4947492 | root | Al | 5.44 | MC |
| SRR4947493 | root | Al | 4.27 | MC |
| SRR4947497 | root | control | 4.96 | MC |
| SRR4947500 | root | Al | 3.95 | MC |
| SRR4947504 | root | control | 4.28 | MC |
| SRR4947505 | root | control | 3.98 | MC |
| SRR4947509 | root | Al | 3.75 | MC |
| SRR6502091 | root | 100 mM NaCl | 4.34 | MC |
| SRR6502092 | root | 100 mM NaCl | 3.76 | MC |
| SRR6502093 | root | 100 mM NaCl | 4.69 | MC |
| SRR6502094 | root | control | 2.51 | MC |
| SRR6502095 | root | control | 2.53 | MC |
| SRR6502096 | root | control | 1.97 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.83 | MC |
| SRR6502104 | root | 100 mM NaCl | 4.87 | MC |
| SRR6502105 | root | 100 mM NaCl | 4.16 | MC |
| SRR6502106 | root | control | 3.87 | MC |
| SRR6502107 | root | control | 2.74 | MC |
| SRR6502108 | root | control | 3.39 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.22 | MC |
| SRR2154082 | seedling | wt | 1.80 | MC |
| SRR2154083 | seedling | wt | 1.47 | MC |
| SRR2154084 | seedling | wt | 0.29 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.97 | MC |
| SRR358791 | seedling | wt | 5.48 | MC |
| SRR358792 | seedling | wt | 5.88 | MC |
| SRR358793 | seedling | wt | 2.32 | MC |
| SRR358794 | seedling | wt | 2.23 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.65 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.61 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.23 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.35 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.96 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.55 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.37 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.30 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.92 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.58 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 3.06 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.11 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.74 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.36 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.21 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.86 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.43 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.98 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.31 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 2.40 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 3.67 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 2.93 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.25 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.14 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 2.77 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.83 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.45 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.08 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 2.55 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 3.31 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.00 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 2.38 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 2.69 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 2.13 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.94 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 4.13 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 2.86 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.33 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 2.44 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.04 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.20 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.82 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.25 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.96 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.66 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.98 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.08 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.71 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.03 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.47 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.48 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.04 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.87 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 3.02 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 3.47 | MC |