| SRR4457251 | 2nd_leaf | DAH4 | 1.31 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.24 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.43 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.68 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.73 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.30 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.66 | MC |
| SRR7265412 | coleoptile | 4dA | 1.63 | MC |
| SRR7265413 | coleoptile | 4dA | 1.37 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.68 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.72 | MC |
| SRR7265380 | embryo | 1hN | 0.38 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.85 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.80 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.73 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.27 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.28 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.42 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.58 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.40 | MC |
| SRR8060836 | leaf | wild_type | 0.51 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.47 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.56 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.68 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.43 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.80 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.37 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.60 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.36 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.53 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.96 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.42 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.46 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.50 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.45 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.98 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.95 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.65 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.75 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.35 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.56 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.67 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.52 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.29 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.48 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.73 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.57 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.57 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.91 | MC |
| SRR1213692 | leaf | wt | 0.63 | MC |
| SRR1213693 | leaf | wt | 1.50 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.67 | MC |
| SRR6502089 | leaf | control | 0.83 | MC |
| SRR6502100 | leaf | control | 1.28 | MC |
| SRR5856927 | leaf | control | 0.73 | MC |
| SRR5856928 | leaf | control | 0.42 | MC |
| SRR5856929 | leaf | control | 0.18 | MC |
| SRR5856930 | leaf | salt | 0.47 | MC |
| SRR5856933 | leaf | control | 0.44 | MC |
| SRR5856934 | leaf | control | 0.21 | MC |
| SRR5856937 | leaf | salt | 0.23 | MC |
| SRR6168981 | leaf | none (control) | 0.23 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.72 | MC |
| SRR5110447 | panicle | Dusk | 0.43 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.28 | MC |
| SRR5126147 | root | "mock,1_day" | 0.65 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.30 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 4.57 | MC |
| SRR5126155 | root | "mock,7_days" | 0.33 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.99 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.91 | MC |
| SRR5126167 | root | "mock,14_days" | 0.76 | MC |
| SRR5126169 | root | "mock,14_days" | 0.29 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.64 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.74 | MC |
| SRR1213694 | root | wt | 1.34 | MC |
| SRR1213695 | root | wt | 2.46 | MC |
| SRR4947485 | root | Al | 3.97 | MC |
| SRR4947499 | root | Al | 0.76 | MC |
| SRR4947501 | root | Al | 0.99 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.34 | MC |
| SRR6502094 | root | control | 3.57 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.37 | MC |
| SRR6441554 | seedling | wild_type | 0.46 | MC |
| SRR6441555 | seedling | wild_type | 0.37 | MC |
| SRR2154086 | seedling | wt | 0.67 | MC |
| SRR2154084 | seedling | wt | 0.69 | MC |
| SRR2154085 | seedling | wt | 0.77 | MC |
| SRR2154087 | seedling | wt | 0.99 | MC |
| SRR3098741 | seedling | wt | 0.64 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.32 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.82 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.33 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.86 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.72 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.37 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.65 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.40 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.34 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.72 | MC |