| SRR358795 | callus | wt | 3.96 | MC |
| SRR358796 | callus | wt | 2.51 | MC |
| SRR358797 | callus | wt | 1.48 | MC |
| SRR358798 | callus | wt | 2.01 | MC |
| SRR5560727 | caryopsis | wild_type | 2.38 | MC |
| SRR5560728 | caryopsis | wild_type | 0.93 | MC |
| SRR5560729 | caryopsis | wild_type | 0.45 | MC |
| SRR7265400 | coleoptile | 2dA | 0.44 | MC |
| SRR7265401 | coleoptile | 2dA | 0.45 | MC |
| SRR7265402 | coleoptile | 2dA | 0.41 | MC |
| SRR7265406 | coleoptile | 3dA | 0.32 | MC |
| SRR7265408 | coleoptile | 3dA | 0.33 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.85 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.83 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.72 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.92 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.73 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.30 | MC |
| SRR8060835 | leaf | wild_type | 2.00 | MC |
| SRR8240824 | leaf | wild_type | 2.76 | MC |
| SRR8240825 | leaf | wild_type | 1.64 | MC |
| SRR8240826 | leaf | wild_type | 0.64 | MC |
| SRR8240818 | leaf | wild_type | 1.17 | MC |
| SRR8240819 | leaf | wild_type | 0.89 | MC |
| SRR8240820 | leaf | wild_type | 1.47 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.77 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.03 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.29 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.59 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.21 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.40 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.44 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.23 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.27 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.81 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.09 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.32 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.15 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.65 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.86 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.47 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.57 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.03 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.83 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.65 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.64 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.45 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.68 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.77 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.86 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.54 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.96 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.52 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.53 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.70 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.92 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.34 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.21 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.67 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.11 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.37 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.83 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.41 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 5.34 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 5.12 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.95 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.06 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 5.34 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 5.12 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.95 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.06 | MC |
| SRR1761528 | leaf | drought | 5.34 | MC |
| SRR1761529 | leaf | drought | 5.12 | MC |
| SRR1761530 | leaf | control | 3.95 | MC |
| SRR1761531 | leaf | control | 3.06 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.64 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.49 | MC |
| SRR6417969 | leaf | H2O_control | 0.46 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.74 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.45 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.51 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.16 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 4.17 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.98 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.58 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.36 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.60 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.63 | MC |
| SRR6502088 | leaf | control | 2.53 | MC |
| SRR6502089 | leaf | control | 1.60 | MC |
| SRR6502090 | leaf | control | 2.10 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.51 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.84 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.50 | MC |
| SRR6502100 | leaf | control | 2.22 | MC |
| SRR6502101 | leaf | control | 1.76 | MC |
| SRR6502102 | leaf | control | 2.19 | MC |
| SRR5856930 | leaf | salt | 1.43 | MC |
| SRR5856931 | leaf | salt | 1.70 | MC |
| SRR5856932 | leaf | salt | 0.99 | MC |
| SRR5856933 | leaf | control | 2.07 | MC |
| SRR5856934 | leaf | control | 1.60 | MC |
| SRR5856935 | leaf | control | 1.62 | MC |
| SRR5856936 | leaf | salt | 0.57 | MC |
| SRR5856937 | leaf | salt | 0.48 | MC |
| SRR5856938 | leaf | salt | 0.77 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.15 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.67 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 6.71 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 11.10 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.79 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 6.33 | MC |
| SRR6168973 | leaf | none (control) | 0.51 | MC |
| SRR6168975 | leaf | none (control) | 0.64 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.42 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.65 | MC |
| SRR8582889 | panicle | AM | 0.37 | MC |
| SRR8582890 | panicle | AM | 2.30 | MC |
| SRR8582891 | panicle | PM | 1.83 | MC |
| SRR8582892 | panicle | PM | 1.48 | MC |
| SRR8582893 | panicle | PM | 1.57 | MC |
| SRR5110429 | panicle | Dawn | 0.44 | MC |
| SRR5110430 | panicle | Dawn | 1.10 | MC |
| SRR5110432 | panicle | Dawn | 0.92 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.92 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.82 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.40 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.58 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.83 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.55 | MC |
| SRR5110446 | panicle | Dusk | 1.18 | MC |
| SRR5110447 | panicle | Dusk | 0.68 | MC |
| SRR5110448 | panicle | Dusk | 1.34 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.64 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.95 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.84 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.94 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.43 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.53 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.46 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.52 | MC |
| SRR4947501 | root | Al | 5.39 | MC |
| SRR3098742 | seedling | wt | 1.31 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.11 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.22 | MC |
| SRR1944583 | seedling | no_treatment | 4.48 | MC |
| SRR358791 | seedling | wt | 3.16 | MC |
| SRR358792 | seedling | wt | 2.75 | MC |
| SRR358793 | seedling | wt | 2.27 | MC |
| SRR358794 | seedling | wt | 2.93 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.05 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.46 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 5.77 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.68 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.88 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.09 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.89 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.34 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.88 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.66 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.62 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.18 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.10 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.50 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.66 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 4.04 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.36 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.74 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.37 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.55 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.11 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.33 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.49 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.23 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.02 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.11 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.50 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.66 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.92 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.94 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.36 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.68 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.17 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.30 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.47 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.11 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 3.38 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.83 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.36 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.47 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.85 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.05 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.15 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.42 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.60 | MC |