| SRR358795 | callus | wt | 1.61 | MC |
| SRR358796 | callus | wt | 1.08 | MC |
| SRR358797 | callus | wt | 1.62 | MC |
| SRR358798 | callus | wt | 1.72 | MC |
| SRR5560727 | caryopsis | wild_type | 0.84 | MC |
| SRR5560728 | caryopsis | wild_type | 0.82 | MC |
| SRR5560729 | caryopsis | wild_type | 0.79 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.42 | MC |
| SRR4947495 | root | control | 1.55 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.12 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.16 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.70 | MC |
| SRR7265376 | embryo | 1hA | 1.89 | MC |
| SRR7265377 | embryo | 1hA | 1.61 | MC |
| SRR7265378 | embryo | 1hA | 1.82 | MC |
| SRR7265379 | embryo | 1hN | 2.14 | MC |
| SRR7265380 | embryo | 1hN | 1.59 | MC |
| SRR7265381 | embryo | 1hN | 1.96 | MC |
| SRR7265382 | embryo | 3hA | 2.24 | MC |
| SRR7265383 | embryo | 3hA | 1.92 | MC |
| SRR7265384 | embryo | 3hA | 1.57 | MC |
| SRR7265385 | embryo | 3hN | 1.42 | MC |
| SRR7265386 | embryo | 3hN | 1.57 | MC |
| SRR7265387 | embryo | 3hN | 1.58 | MC |
| SRR7265388 | embryo | 12hA | 4.60 | MC |
| SRR7265389 | embryo | 12hA | 4.23 | MC |
| SRR7265390 | embryo | 12hA | 4.16 | MC |
| SRR7265391 | embryo | 12hN | 4.39 | MC |
| SRR7265392 | embryo | 12hN | 3.81 | MC |
| SRR7265393 | embryo | 12hN | 4.58 | MC |
| SRR7265394 | embryo | 24hA | 4.33 | MC |
| SRR7265395 | embryo | 24hA | 4.37 | MC |
| SRR7265397 | embryo | 24hN | 3.81 | MC |
| SRR7265398 | embryo | 24hN | 4.04 | MC |
| SRR7265399 | embryo | 24hN | 3.28 | MC |
| SRR2338866 | endosprem | control | 4.10 | MC |
| SRR2338869 | endosprem | high_temperature | 2.61 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.43 | MC |
| SRR8240824 | leaf | wild_type | 0.94 | MC |
| SRR8240825 | leaf | wild_type | 0.36 | MC |
| SRR8240826 | leaf | wild_type | 0.66 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.81 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.62 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.41 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.72 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.38 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.67 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.51 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.58 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.25 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.23 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.30 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.53 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.67 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.42 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.42 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.41 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.36 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.35 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.70 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.70 | MC |
| SRR1761529 | leaf | drought | 0.70 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.27 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.04 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.38 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.40 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.30 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.28 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.48 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.30 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.49 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.37 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.69 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.72 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.70 | MC |
| SRR6502088 | leaf | control | 0.37 | MC |
| SRR6502089 | leaf | control | 0.43 | MC |
| SRR6502090 | leaf | control | 0.72 | MC |
| SRR5856927 | leaf | control | 0.20 | MC |
| SRR5856928 | leaf | control | 0.27 | MC |
| SRR5856929 | leaf | control | 0.25 | MC |
| SRR5856932 | leaf | salt | 0.20 | MC |
| SRR5856936 | leaf | salt | 0.18 | MC |
| SRR5856937 | leaf | salt | 0.15 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.41 | MC |
| SRR6168979 | leaf | none (control) | 1.02 | MC |
| SRR6168980 | leaf | none (control) | 1.45 | MC |
| SRR8582888 | panicle | AM | 0.79 | MC |
| SRR8582889 | panicle | AM | 1.12 | MC |
| SRR8582890 | panicle | AM | 0.45 | MC |
| SRR8582891 | panicle | PM | 0.59 | MC |
| SRR8582893 | panicle | PM | 0.73 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.06 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.50 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.48 | MC |
| SRR5126147 | root | "mock,1_day" | 0.83 | MC |
| SRR5126148 | root | "mock,1_day" | 0.88 | MC |
| SRR5126149 | root | "mock,1_day" | 0.82 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.56 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.58 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.54 | MC |
| SRR5126153 | root | "mock,7_days" | 0.83 | MC |
| SRR5126155 | root | "mock,7_days" | 0.73 | MC |
| SRR5126157 | root | "mock,7_days" | 1.34 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.47 | MC |
| SRR5126167 | root | "mock,14_days" | 1.46 | MC |
| SRR5126169 | root | "mock,14_days" | 0.88 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.43 | MC |
| SRR4947479 | root | control | 0.66 | MC |
| SRR4947483 | root | Al | 0.82 | MC |
| SRR4947487 | root | control | 1.14 | MC |
| SRR4947491 | root | Al | 0.97 | MC |
| SRR4947499 | root | Al | 1.10 | MC |
| SRR4947503 | root | control | 1.06 | MC |
| SRR4947507 | root | Al | 0.92 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.46 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.66 | MC |
| SRR6502094 | root | control | 1.73 | MC |
| SRR6502096 | root | control | 2.04 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.84 | MC |
| SRR1740431 | root_elongation_zone | wt | 2.55 | MC |
| SRR1740433 | root_elongation_zone | wt | 3.21 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.33 | MC |
| SRR1740430 | root_meristematic_zone | wt | 3.24 | MC |
| SRR6441554 | seedling | wild_type | 0.35 | MC |
| SRR2154082 | seedling | wt | 1.17 | MC |
| SRR3098741 | seedling | wt | 0.32 | MC |
| SRR3098742 | seedling | wt | 0.51 | MC |
| SRR3098743 | seedling | wt | 0.38 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.52 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.64 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.68 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.79 | MC |
| SRR358791 | seedling | wt | 0.72 | MC |
| SRR358793 | seedling | wt | 0.74 | MC |
| SRR358794 | seedling | wt | 0.64 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.33 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.46 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.66 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.57 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.97 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.93 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.85 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.46 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.37 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.23 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.04 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.97 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.33 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.76 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.66 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.43 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.42 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.40 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.20 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.03 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.54 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.42 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.38 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.34 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.36 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.65 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.82 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.33 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.41 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.37 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.50 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.29 | MC |