| SRR358795 | callus | wt | 4.45 | MC |
| SRR358796 | callus | wt | 3.90 | MC |
| SRR358797 | callus | wt | 3.01 | MC |
| SRR358798 | callus | wt | 4.32 | MC |
| SRR5560727 | caryopsis | wild_type | 0.66 | MC |
| SRR5560728 | caryopsis | wild_type | 0.26 | MC |
| SRR5560729 | caryopsis | wild_type | 0.52 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.40 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.79 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.96 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.54 | MC |
| SRR7265400 | coleoptile | 2dA | 0.29 | MC |
| SRR7265402 | coleoptile | 2dA | 0.33 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.58 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.52 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.47 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.40 | MC |
| SRR7265376 | embryo | 1hA | 0.89 | MC |
| SRR7265377 | embryo | 1hA | 1.15 | MC |
| SRR7265378 | embryo | 1hA | 0.79 | MC |
| SRR7265379 | embryo | 1hN | 0.43 | MC |
| SRR7265380 | embryo | 1hN | 0.52 | MC |
| SRR7265381 | embryo | 1hN | 0.57 | MC |
| SRR7265385 | embryo | 3hN | 2.23 | MC |
| SRR7265386 | embryo | 3hN | 1.45 | MC |
| SRR7265387 | embryo | 3hN | 1.57 | MC |
| SRR7265389 | embryo | 12hA | 0.47 | MC |
| SRR7265391 | embryo | 12hN | 0.99 | MC |
| SRR7265392 | embryo | 12hN | 1.01 | MC |
| SRR7265393 | embryo | 12hN | 0.96 | MC |
| SRR7265398 | embryo | 24hN | 0.55 | MC |
| SRR2338866 | endosprem | control | 1.36 | MC |
| SRR2338867 | endosprem | control | 0.64 | MC |
| SRR2338868 | endosprem | high_temperature | 1.14 | MC |
| SRR2338869 | endosprem | high_temperature | 0.93 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.98 | MC |
| SRR8060836 | leaf | wild_type | 0.40 | MC |
| SRR8240824 | leaf | wild_type | 0.46 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.59 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.61 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.04 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.18 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.66 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.01 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.05 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.15 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.91 | MC |
| SRR6417967 | leaf | H2O_control | 3.00 | MC |
| SRR6417969 | leaf | H2O_control | 0.55 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.27 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.30 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.98 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.77 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.71 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.58 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.55 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.55 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.27 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.45 | MC |
| SRR6502089 | leaf | control | 1.35 | MC |
| SRR6502090 | leaf | control | 0.46 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 4.37 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.74 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.26 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.02 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.77 | MC |
| SRR8582893 | panicle | PM | 0.34 | MC |
| SRR4947496 | root | control | 0.75 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.73 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.14 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.38 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.16 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.73 | MC |
| SRR5126148 | root | "mock,1_day" | 3.26 | MC |
| SRR5126149 | root | "mock,1_day" | 0.66 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.64 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.94 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.82 | MC |
| SRR5126153 | root | "mock,7_days" | 0.45 | MC |
| SRR5126155 | root | "mock,7_days" | 0.79 | MC |
| SRR5126157 | root | "mock,7_days" | 2.09 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.36 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.96 | MC |
| SRR5126165 | root | "mock,14_days" | 0.60 | MC |
| SRR5126169 | root | "mock,14_days" | 0.46 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.02 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.68 | MC |
| SRR1213694 | root | wt | 1.09 | MC |
| SRR4947480 | root | control | 0.74 | MC |
| SRR4947492 | root | Al | 0.72 | MC |
| SRR4947504 | root | control | 0.84 | MC |
| SRR6502094 | root | control | 0.62 | MC |
| SRR6502096 | root | control | 0.68 | MC |
| SRR6502107 | root | control | 0.34 | MC |
| SRR6441554 | seedling | wild_type | 0.29 | MC |
| SRR2154086 | seedling | wt | 1.82 | MC |
| SRR2154084 | seedling | wt | 2.09 | MC |
| SRR2154085 | seedling | wt | 1.65 | MC |
| SRR3098741 | seedling | wt | 0.24 | MC |
| SRR3098742 | seedling | wt | 0.21 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.25 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.02 | MC |
| SRR1944583 | seedling | no_treatment | 1.16 | MC |
| SRR358791 | seedling | wt | 2.30 | MC |
| SRR358792 | seedling | wt | 2.44 | MC |
| SRR358794 | seedling | wt | 0.50 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.37 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.80 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.08 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.53 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.13 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.14 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.41 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.61 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.50 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.02 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.81 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.77 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.83 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.72 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.56 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.47 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.31 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.39 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.84 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.50 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.67 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.68 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.49 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.99 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.43 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.39 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.29 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.88 | MC |