| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.62 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.83 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.98 | MC |
| SRR4947495 | root | control | 0.83 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.83 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.23 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.02 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.36 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.30 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.59 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.60 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.44 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.97 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.40 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.42 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.42 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.71 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.33 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.62 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.92 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.30 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.66 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.11 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.48 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.59 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.47 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.37 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.54 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.79 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.79 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.54 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.46 | MC |
| SRR1213692 | leaf | wt | 0.44 | MC |
| SRR1213693 | leaf | wt | 1.41 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.79 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 3.25 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.57 | MC |
| SRR6502088 | leaf | control | 2.01 | MC |
| SRR6502089 | leaf | control | 1.66 | MC |
| SRR6502090 | leaf | control | 1.92 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.46 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.92 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.48 | MC |
| SRR6502100 | leaf | control | 3.00 | MC |
| SRR6502101 | leaf | control | 1.46 | MC |
| SRR6502102 | leaf | control | 2.56 | MC |
| SRR6168979 | leaf | none (control) | 0.26 | MC |
| SRR6168980 | leaf | none (control) | 0.27 | MC |
| SRR6168981 | leaf | none (control) | 0.29 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.09 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.80 | MC |
| SRR8582891 | panicle | PM | 0.55 | MC |
| SRR8582893 | panicle | PM | 0.54 | MC |
| SRR5110446 | panicle | Dusk | 0.33 | MC |
| SRR5110447 | panicle | Dusk | 0.35 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.33 | MC |
| SRR1633182 | panicle | WT | 2.18 | MC |
| SRR1633185 | panicle | WT | 1.82 | MC |
| SRR5126147 | root | "mock,1_day" | 2.30 | MC |
| SRR5126148 | root | "mock,1_day" | 0.51 | MC |
| SRR5126149 | root | "mock,1_day" | 1.47 | MC |
| SRR5126153 | root | "mock,7_days" | 1.25 | MC |
| SRR5126155 | root | "mock,7_days" | 1.47 | MC |
| SRR5126157 | root | "mock,7_days" | 1.64 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.05 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.99 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.35 | MC |
| SRR5126167 | root | "mock,14_days" | 2.65 | MC |
| SRR5126169 | root | "mock,14_days" | 1.05 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.00 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.10 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.04 | MC |
| SRR1213694 | root | wt | 2.78 | MC |
| SRR1213695 | root | wt | 0.84 | MC |
| SRR4947478 | root | control | 1.23 | MC |
| SRR4947482 | root | Al | 0.49 | MC |
| SRR4947490 | root | Al | 0.78 | MC |
| SRR4947494 | root | control | 0.67 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.91 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.67 | MC |
| SRR6502093 | root | 100 mM NaCl | 2.58 | MC |
| SRR6502094 | root | control | 4.38 | MC |
| SRR6502095 | root | control | 3.73 | MC |
| SRR6502103 | root | 100 mM NaCl | 2.39 | MC |
| SRR6502104 | root | 100 mM NaCl | 2.01 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.36 | MC |
| SRR6502106 | root | control | 3.77 | MC |
| SRR6502107 | root | control | 2.15 | MC |
| SRR6502108 | root | control | 2.72 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.27 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.57 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.41 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.72 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.01 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.82 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.45 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.14 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.97 | MC |
| SRR2154086 | seedling | wt | 2.98 | MC |
| SRR2154082 | seedling | wt | 0.97 | MC |
| SRR2154083 | seedling | wt | 0.74 | MC |
| SRR2154084 | seedling | wt | 0.75 | MC |
| SRR2154087 | seedling | wt | 0.66 | MC |
| SRR3098742 | seedling | wt | 0.44 | MC |
| SRR3098743 | seedling | wt | 1.21 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.58 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.08 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.92 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.22 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.70 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 13.12 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.44 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.92 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.27 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.71 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.47 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.62 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.46 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.10 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.35 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.32 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 5.96 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 7.57 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 7.20 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.23 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.73 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.48 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.91 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 3.55 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 2.62 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.55 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.25 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.51 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.90 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.63 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.53 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.31 | MC |