| SRR4457253 | 2nd_leaf | DAH12 | 0.32 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.28 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.68 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.43 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.82 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.67 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.56 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.66 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.78 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.50 | MC |
| SRR5560727 | caryopsis | wild_type | 0.28 | MC |
| SRR5560728 | caryopsis | wild_type | 0.28 | MC |
| SRR5560729 | caryopsis | wild_type | 0.46 | MC |
| SRR2338868 | endosprem | high_temperature | 0.54 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.25 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.31 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.29 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.51 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.36 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.43 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.99 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.96 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.43 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.46 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.24 | MC |
| SRR4457248 | flag_leaf | DAH44 | 0.70 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.43 | MC |
| SRR8060835 | leaf | wild_type | 0.61 | MC |
| SRR8060836 | leaf | wild_type | 0.58 | MC |
| SRR8060837 | leaf | wild_type | 0.37 | MC |
| SRR8240825 | leaf | wild_type | 0.53 | MC |
| SRR8240826 | leaf | wild_type | 0.23 | MC |
| SRR8240818 | leaf | wild_type | 0.29 | MC |
| SRR8240819 | leaf | wild_type | 0.26 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.38 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.43 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.60 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.46 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.33 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.35 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.56 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.22 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.32 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.60 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.60 | MC |
| SRR1761528 | leaf | drought | 0.60 | MC |
| SRR504365 | leaf | wt | 0.62 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.24 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.31 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.27 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.35 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.41 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.32 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.22 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.30 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.63 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.14 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.74 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.95 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.65 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.43 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.29 | MC |
| SRR1213692 | leaf | wt | 1.09 | MC |
| SRR1213693 | leaf | wt | 1.00 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.38 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.61 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.35 | MC |
| SRR6168973 | leaf | none (control) | 0.61 | MC |
| SRR6168974 | leaf | none (control) | 1.05 | MC |
| SRR6168975 | leaf | none (control) | 0.84 | MC |
| SRR6168979 | leaf | none (control) | 0.40 | MC |
| SRR6168981 | leaf | none (control) | 1.36 | MC |
| SRR8582893 | panicle | PM | 0.47 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.33 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.18 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.48 | MC |
| SRR1633182 | panicle | WT | 0.98 | MC |
| SRR1633185 | panicle | WT | 1.57 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.26 | MC |
| SRR5126155 | root | "mock,7_days" | 0.34 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.37 | MC |
| SRR1213695 | root | wt | 1.15 | MC |
| SRR4947485 | root | Al | 0.69 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.38 | MC |
| SRR6502107 | root | control | 0.28 | MC |
| SRR6441554 | seedling | wild_type | 0.27 | MC |
| SRR2154086 | seedling | wt | 0.59 | MC |
| SRR2154087 | seedling | wt | 0.34 | MC |
| SRR3098742 | seedling | wt | 0.19 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.26 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.47 | MC |
| SRR1944583 | seedling | no_treatment | 0.36 | MC |
| SRR358791 | seedling | wt | 0.62 | MC |
| SRR358793 | seedling | wt | 0.51 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.38 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.11 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.96 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.23 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 3.99 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.50 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.27 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.25 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.18 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.37 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.48 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.15 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.93 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.62 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.97 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.33 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.38 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.68 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.95 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.67 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.78 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.23 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.69 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.31 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.76 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.36 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.85 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.42 | MC |