| SRR3745126 | anther | wt | 1.44 | MC |
| SRR358795 | callus | wt | 2.70 | MC |
| SRR358796 | callus | wt | 1.67 | MC |
| SRR358797 | callus | wt | 4.66 | MC |
| SRR358798 | callus | wt | 1.98 | MC |
| SRR4947495 | root | control | 0.96 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.91 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.89 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.77 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.38 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.73 | MC |
| SRR7265379 | embryo | 1hN | 0.28 | MC |
| SRR1213691 | flower | wt | 0.29 | MC |
| SRR8060837 | leaf | wild_type | 2.61 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.68 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.12 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.82 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.42 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.17 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.49 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.75 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.63 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.62 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.50 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.06 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.75 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.45 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.50 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.06 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.75 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.45 | MC |
| SRR1761528 | leaf | drought | 1.50 | MC |
| SRR1761529 | leaf | drought | 1.06 | MC |
| SRR1761530 | leaf | control | 0.75 | MC |
| SRR1761531 | leaf | control | 1.45 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.73 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.03 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.20 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.53 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.49 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.66 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.85 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.96 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.58 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.45 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.77 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.00 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.70 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.63 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.88 | MC |
| SRR6502088 | leaf | control | 1.77 | MC |
| SRR6502089 | leaf | control | 0.73 | MC |
| SRR6502090 | leaf | control | 0.80 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.83 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.21 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.80 | MC |
| SRR6502100 | leaf | control | 1.16 | MC |
| SRR6502101 | leaf | control | 1.35 | MC |
| SRR6502102 | leaf | control | 1.12 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.53 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.34 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.94 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.66 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 4.57 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.21 | MC |
| SRR6168975 | leaf | none (control) | 0.35 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.79 | MC |
| SRR6168980 | leaf | none (control) | 0.26 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.81 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.40 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.37 | MC |
| SRR5110429 | panicle | Dawn | 4.57 | MC |
| SRR5110430 | panicle | Dawn | 3.41 | MC |
| SRR5110432 | panicle | Dawn | 2.27 | MC |
| SRR4947496 | root | control | 0.53 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.44 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 3.74 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.86 | MC |
| SRR5110438 | panicle | Dawn + 7h | 4.12 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.93 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 4.14 | MC |
| SRR5110446 | panicle | Dusk | 3.98 | MC |
| SRR5110447 | panicle | Dusk | 3.54 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.59 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.97 | MC |
| SRR5110452 | panicle | Dawn + 14h | 4.21 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.20 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.80 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 3.19 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.17 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.08 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.20 | MC |
| SRR1633182 | panicle | WT | 0.47 | MC |
| SRR1633185 | panicle | WT | 0.69 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.56 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 3.24 | MC |
| SRR5126157 | root | "mock,7_days" | 0.38 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.65 | MC |
| SRR1213695 | root | wt | 0.13 | MC |
| SRR4947478 | root | control | 1.14 | MC |
| SRR4947479 | root | control | 1.59 | MC |
| SRR4947480 | root | control | 0.52 | MC |
| SRR4947482 | root | Al | 1.71 | MC |
| SRR4947483 | root | Al | 1.96 | MC |
| SRR4947485 | root | Al | 0.78 | MC |
| SRR4947487 | root | control | 0.80 | MC |
| SRR4947490 | root | Al | 1.46 | MC |
| SRR4947491 | root | Al | 1.38 | MC |
| SRR4947493 | root | Al | 0.89 | MC |
| SRR4947494 | root | control | 1.20 | MC |
| SRR4947497 | root | control | 0.98 | MC |
| SRR4947498 | root | Al | 2.88 | MC |
| SRR4947499 | root | Al | 1.12 | MC |
| SRR4947500 | root | Al | 0.95 | MC |
| SRR4947502 | root | control | 1.49 | MC |
| SRR4947503 | root | control | 1.23 | MC |
| SRR4947506 | root | Al | 1.64 | MC |
| SRR4947507 | root | Al | 3.07 | MC |
| SRR4947509 | root | Al | 2.00 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.96 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.89 | MC |
| SRR6502093 | root | 100 mM NaCl | 4.00 | MC |
| SRR6502094 | root | control | 0.70 | MC |
| SRR6502095 | root | control | 1.25 | MC |
| SRR6502096 | root | control | 1.44 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.99 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.23 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.79 | MC |
| SRR6502106 | root | control | 1.71 | MC |
| SRR6502107 | root | control | 0.86 | MC |
| SRR6502108 | root | control | 1.01 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.20 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.09 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.68 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.67 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.46 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.17 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.73 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.03 | MC |
| SRR2154082 | seedling | wt | 3.07 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.35 | MC |
| SRR1944583 | seedling | no_treatment | 1.82 | MC |
| SRR358791 | seedling | wt | 2.80 | MC |
| SRR358792 | seedling | wt | 4.72 | MC |
| SRR358793 | seedling | wt | 2.73 | MC |
| SRR358794 | seedling | wt | 2.58 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.69 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.10 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.15 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.37 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.38 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.64 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.21 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.80 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.43 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.14 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.66 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.49 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.58 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.82 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.34 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.29 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.27 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.57 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.51 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.32 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.37 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.31 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.81 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.26 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 5.02 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 3.11 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 3.67 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.60 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 2.04 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.89 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.86 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 2.79 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.76 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 6.63 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 4.33 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 2.06 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 5.63 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.20 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.29 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.73 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.57 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.22 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.07 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.10 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.35 | MC |