| SRR4457259 | 2nd_leaf | DAH28 | 3.80 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.26 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.70 | MC |
| SRR358795 | callus | wt | 4.64 | MC |
| SRR358796 | callus | wt | 5.47 | MC |
| SRR358797 | callus | wt | 5.55 | MC |
| SRR358798 | callus | wt | 6.68 | MC |
| SRR6320498 | carpel | wt | 2.86 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.16 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.58 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.84 | MC |
| SRR4947495 | root | control | 3.28 | MC |
| SRR7265400 | coleoptile | 2dA | 3.26 | MC |
| SRR7265401 | coleoptile | 2dA | 3.49 | MC |
| SRR7265402 | coleoptile | 2dA | 3.40 | MC |
| SRR7265406 | coleoptile | 3dA | 2.43 | MC |
| SRR7265407 | coleoptile | 3dA | 2.57 | MC |
| SRR7265408 | coleoptile | 3dA | 1.81 | MC |
| SRR7265412 | coleoptile | 4dA | 2.81 | MC |
| SRR7265413 | coleoptile | 4dA | 4.34 | MC |
| SRR7265414 | coleoptile | 4dA | 2.73 | MC |
| SRR7265415 | coleoptile | 4dN | 3.89 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.80 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.17 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.19 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.88 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.88 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.15 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.99 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.15 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.24 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.65 | MC |
| SRR7265373 | embryo | dry seed 0 h | 3.61 | MC |
| SRR7265374 | embryo | dry seed 0 h | 3.96 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.72 | MC |
| SRR7265376 | embryo | 1hA | 2.48 | MC |
| SRR7265377 | embryo | 1hA | 2.17 | MC |
| SRR7265378 | embryo | 1hA | 1.88 | MC |
| SRR7265379 | embryo | 1hN | 2.67 | MC |
| SRR7265380 | embryo | 1hN | 2.00 | MC |
| SRR7265381 | embryo | 1hN | 2.15 | MC |
| SRR7265382 | embryo | 3hA | 3.18 | MC |
| SRR7265383 | embryo | 3hA | 3.16 | MC |
| SRR7265384 | embryo | 3hA | 2.68 | MC |
| SRR7265385 | embryo | 3hN | 3.71 | MC |
| SRR7265386 | embryo | 3hN | 1.86 | MC |
| SRR7265387 | embryo | 3hN | 2.75 | MC |
| SRR7265388 | embryo | 12hA | 4.38 | MC |
| SRR7265389 | embryo | 12hA | 4.75 | MC |
| SRR7265391 | embryo | 12hN | 4.02 | MC |
| SRR7265393 | embryo | 12hN | 4.46 | MC |
| SRR7265394 | embryo | 24hA | 5.18 | MC |
| SRR7265395 | embryo | 24hA | 4.64 | MC |
| SRR7265396 | embryo | 24hA | 4.58 | MC |
| SRR7265398 | embryo | 24hN | 4.35 | MC |
| SRR2338866 | endosprem | control | 3.39 | MC |
| SRR2338867 | endosprem | control | 0.41 | MC |
| SRR2338868 | endosprem | high_temperature | 1.10 | MC |
| SRR2338869 | endosprem | high_temperature | 1.71 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.69 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.96 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.76 | MC |
| SRR4457248 | flag_leaf | DAH44 | 5.06 | MC |
| SRR8240826 | leaf | wild_type | 0.47 | MC |
| SRR8240819 | leaf | wild_type | 0.57 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.22 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.85 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.62 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.03 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.67 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.56 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.85 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.79 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.03 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.88 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.44 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.40 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.85 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.17 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.51 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.43 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.18 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.25 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.21 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.11 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.25 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.21 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.11 | MC |
| SRR1761528 | leaf | drought | 2.25 | MC |
| SRR1761529 | leaf | drought | 3.21 | MC |
| SRR1761530 | leaf | control | 3.11 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.68 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.82 | MC |
| SRR6417968 | leaf | H2O_control | 3.58 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.59 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.83 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.52 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.56 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.88 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.92 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.31 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.49 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.96 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.47 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.28 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.85 | MC |
| SRR6502088 | leaf | control | 1.93 | MC |
| SRR6502089 | leaf | control | 2.21 | MC |
| SRR6502090 | leaf | control | 2.18 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.48 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 4.20 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 4.48 | MC |
| SRR6502100 | leaf | control | 1.97 | MC |
| SRR6502101 | leaf | control | 1.71 | MC |
| SRR6502102 | leaf | control | 1.52 | MC |
| SRR5856927 | leaf | control | 0.65 | MC |
| SRR5856928 | leaf | control | 1.49 | MC |
| SRR5856929 | leaf | control | 1.10 | MC |
| SRR5856930 | leaf | salt | 0.64 | MC |
| SRR5856931 | leaf | salt | 0.39 | MC |
| SRR5856932 | leaf | salt | 0.28 | MC |
| SRR5856933 | leaf | control | 1.60 | MC |
| SRR5856934 | leaf | control | 1.53 | MC |
| SRR5856935 | leaf | control | 1.28 | MC |
| SRR5856936 | leaf | salt | 0.89 | MC |
| SRR5856937 | leaf | salt | 0.57 | MC |
| SRR5856938 | leaf | salt | 0.84 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.91 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 3.72 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 7.51 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 7.19 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 3.63 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 6.26 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 6.49 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.12 | MC |
| SRR6168975 | leaf | none (control) | 5.14 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.63 | MC |
| SRR6168979 | leaf | none (control) | 0.43 | MC |
| SRR6168980 | leaf | none (control) | 0.62 | MC |
| SRR6168981 | leaf | none (control) | 1.37 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 2.17 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.19 | MC |
| SRR8582891 | panicle | PM | 4.10 | MC |
| SRR8582892 | panicle | PM | 5.02 | MC |
| SRR8582893 | panicle | PM | 3.39 | MC |
| SRR4947496 | root | control | 2.97 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.60 | MC |
| SRR1633182 | panicle | WT | 2.13 | MC |
| SRR1633185 | panicle | WT | 1.92 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.19 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.20 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 4.48 | MC |
| SRR5126147 | root | "mock,1_day" | 2.30 | MC |
| SRR5126148 | root | "mock,1_day" | 3.01 | MC |
| SRR5126149 | root | "mock,1_day" | 2.12 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.38 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.83 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.59 | MC |
| SRR5126153 | root | "mock,7_days" | 3.01 | MC |
| SRR5126155 | root | "mock,7_days" | 2.82 | MC |
| SRR5126157 | root | "mock,7_days" | 3.44 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.36 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.88 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 3.07 | MC |
| SRR5126165 | root | "mock,14_days" | 3.21 | MC |
| SRR5126167 | root | "mock,14_days" | 1.91 | MC |
| SRR5126169 | root | "mock,14_days" | 4.01 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.53 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.22 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.30 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.43 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.85 | MC |
| SRR1213694 | root | wt | 2.76 | MC |
| SRR4947478 | root | control | 2.29 | MC |
| SRR4947479 | root | control | 3.16 | MC |
| SRR4947480 | root | control | 2.92 | MC |
| SRR4947481 | root | control | 3.68 | MC |
| SRR4947482 | root | Al | 3.15 | MC |
| SRR4947484 | root | Al | 3.58 | MC |
| SRR4947485 | root | Al | 2.89 | MC |
| SRR4947488 | root | control | 2.59 | MC |
| SRR4947489 | root | control | 2.34 | MC |
| SRR4947490 | root | Al | 4.31 | MC |
| SRR4947492 | root | Al | 2.74 | MC |
| SRR4947493 | root | Al | 1.97 | MC |
| SRR4947494 | root | control | 2.77 | MC |
| SRR4947498 | root | Al | 5.29 | MC |
| SRR4947499 | root | Al | 4.50 | MC |
| SRR4947500 | root | Al | 4.15 | MC |
| SRR4947501 | root | Al | 5.75 | MC |
| SRR4947504 | root | control | 4.35 | MC |
| SRR4947505 | root | control | 4.96 | MC |
| SRR4947506 | root | Al | 3.31 | MC |
| SRR4947508 | root | Al | 3.97 | MC |
| SRR4947509 | root | Al | 4.46 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.59 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.05 | MC |
| SRR6502093 | root | 100 mM NaCl | 2.56 | MC |
| SRR6502094 | root | control | 1.38 | MC |
| SRR6502095 | root | control | 1.38 | MC |
| SRR6502096 | root | control | 2.50 | MC |
| SRR6502103 | root | 100 mM NaCl | 2.27 | MC |
| SRR6502104 | root | 100 mM NaCl | 2.42 | MC |
| SRR6502105 | root | 100 mM NaCl | 2.54 | MC |
| SRR6502106 | root | control | 1.81 | MC |
| SRR6502107 | root | control | 2.37 | MC |
| SRR6502108 | root | control | 1.94 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.51 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.23 | MC |
| SRR1740436 | root_differentiation_zone | wt | 3.18 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.72 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.73 | MC |
| SRR1740433 | root_elongation_zone | wt | 3.07 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.34 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.83 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.16 | MC |
| SRR6441554 | seedling | wild_type | 2.70 | MC |
| SRR6441555 | seedling | wild_type | 1.68 | MC |
| SRR3098742 | seedling | wt | 2.71 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.82 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.67 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.09 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.89 | MC |
| SRR1944583 | seedling | no_treatment | 2.90 | MC |
| SRR358791 | seedling | wt | 4.96 | MC |
| SRR358792 | seedling | wt | 4.04 | MC |
| SRR358793 | seedling | wt | 6.12 | MC |
| SRR358794 | seedling | wt | 6.47 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.59 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.08 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.99 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.08 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.36 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.62 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.18 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.31 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.37 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.53 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.82 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.78 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.33 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.62 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.21 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.90 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.89 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 9.68 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 7.84 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 8.47 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.59 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.03 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.17 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.20 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.38 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.53 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.60 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.25 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 3.68 | MC |