| SRR4457249 | 2nd_leaf | DAH4 | 1.02 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.67 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.78 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.41 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.69 | MC |
| SRR358797 | callus | wt | 0.87 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.37 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.57 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.50 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.31 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.56 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.65 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.27 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.41 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.35 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.35 | MC |
| SRR1761529 | leaf | drought | 1.35 | MC |
| SRR504365 | leaf | wt | 0.53 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.50 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.96 | MC |
| SRR1213692 | leaf | wt | 0.30 | MC |
| SRR1213693 | leaf | wt | 2.27 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.16 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 4.60 | MC |
| SRR6502101 | leaf | control | 1.68 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.36 | MC |
| SRR6168980 | leaf | none (control) | 0.29 | MC |
| SRR6168981 | leaf | none (control) | 0.37 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.84 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.60 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.86 | MC |
| SRR1633182 | panicle | WT | 1.15 | MC |
| SRR1633185 | panicle | WT | 4.30 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.37 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.63 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.53 | MC |
| SRR5126153 | root | "mock,7_days" | 0.32 | MC |
| SRR5126155 | root | "mock,7_days" | 0.34 | MC |
| SRR5126157 | root | "mock,7_days" | 0.97 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.58 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.30 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.67 | MC |
| SRR5126165 | root | "mock,14_days" | 0.49 | MC |
| SRR5126167 | root | "mock,14_days" | 0.48 | MC |
| SRR5126169 | root | "mock,14_days" | 0.45 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.89 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.97 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.84 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.62 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.34 | MC |
| SRR1213694 | root | wt | 1.63 | MC |
| SRR1213695 | root | wt | 0.84 | MC |
| SRR2154086 | seedling | wt | 0.61 | MC |
| SRR2154087 | seedling | wt | 0.47 | MC |
| SRR3098741 | seedling | wt | 0.45 | MC |
| SRR3098743 | seedling | wt | 0.16 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.39 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.42 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.43 | MC |
| SRR358794 | seedling | wt | 0.55 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.07 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.34 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.89 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.06 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.60 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.56 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.25 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.98 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.29 | MC |